Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0787 ATGGATAATGATAATAATGTTCATGTGAGGTTCTTATTCTTTACATCACTATTCTTTTTCTTAACAGCATCCATTAGTGCTCAAAATAACAACACCAAACACGAAGAGTGTAGCCAGCCATACAGCTGCGGACAGTATTCCATATACTACCCTTTCTGGGGAGGGATCAGACCCAATTATTGTGCCAGCAATGACCAATTGAAGCTCCAATGCGAGGGTAATCAAAACACCACCATTCAACTTGGTTCACAAAGTTTCCAAGTGCTTCACTTTGATGATCCAGTGCATTACACCTTGACCATGGTTCGAACAGGCCTCATCTATGATCATTGTTCTTCCTCGGCCTTAACCAACACTTCCTTCAACTCGAGTCTCTTTCGTTACTCGCAAAATGTTACCAACATCACCATCTTCTATGGTTGTCCTAGCTCCGTGTTTGCGAATAGGAATTACTCTTTTCCATGCAAGGAAGATCACAATATGAGTGCTTTCTATGGGGACCCCGAAACTGCAAGAGTTCAAGACTGTGAAGGACCTAGGATTGAAGTGCAAGTATCAAAGGAACCTGTGCTTGGTGAAGGAATTGAAGGGCTGAACAAAGCTTTGAGTGAAGGGTTCAGAGTGCATCTTATTTCAGAGGCTCAAGTTCAACAGTGCTTAGAATGCGTTGTAAGTAATGGAACATGTGGGGCTAATGATGAGTCTCAGTTTACATGTTTTTGCCAGGATGGAACTGAAGGTTTAGATTGTTCTGATCATCATAGTAATAAATGGAATTGGGAAAGGAAGGTTGGTATAGGCGTTTCTGCTGCTGTGCTCGGGGCAATTGTAGTCAGCATTGGCTTTTATATCTGTAGTCGTCAGAAGAAGAAGAAAAATCTTCATGCAGTATCATCATCTGTACAATCTAAAGAAACCTCTTATAGTTCTTCTATAGAAGATACTGAGAAGGGATGCACATACTTTGGAGTCCATTTCTTCACTTATAGTGAACTTGAAGAGGCCACCAACTTCTTTGATCCTGCCAGAGAACTAGGAGATGGAGGATTTGGAACTGTGTATTTTGGCAAACTTCACGATGGACGTGTAGTTGCAGTGAAGAGAATGTACGAGAACAGTTATAGAAGAGTGGAGCAATTCGTGAATGAAGTAGAGATCCTAACAGGCCTACACCACCAAAACCTCGTGTCACTGTACGGATGCACATCTCGACACAGCAGAGAACTTCTGCTCGTATACGAATACATTCCAAATGGAACCGTTGCTGATCACCTCCACGGCCAAAGAGCGAAACCTGGCACACTTGCTTGGCACACAAGAATGAACATTGCCATAGAGACTGCTAGTGCACTGGTGTATCTCCACGCCTCTGAAATCATCCACAGGGACGTGAAAACGAATAACATTCTCCTCGACAATCACTTCAGTGTGAAAGTAGCGGATTTTGGCCTCTCGCGTCTCTTGCCAACGCACGCCACACACGTTTCCACCGCGCCACAAGGGACTCCAGGTTATGTGGATCCTGAGTACAATGAGTATTACCAACTCACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGATTGAGCTCATATCATCGATGCCTGCGGTTGATATCTCGAGGCGTAGGCATGAGATAAACCTGTCCAATATGGCCATTAAGAAGATACAAAGTGGGGCATTGCATGAGATTGTGGACACTACTCTTGGGTTTGAGACGGATTTCAAGGTGAGGAAAATGATCAGTGCTGTGGCTGAGTTGGCCTTTCAGTGCTTGCAGAGTTCAAAAGATGTTAGGCCCTCTATGGCAGAAGTGTTGGATAGGCTAGAGGATATTAGAAGTGATGGGAGTCATAGGAGCAAGCATGAGGTGCTAGATATATCAGAAGATGATGCTGCTTTGCTCAAGAATGTGCCTCCTCCACCTTCACCTGATTCACATTTGGTGACCATTTCTAATTCTACACCACCAAATGATAGCCAGTGA 1992 0.4372 MDNDNNVHVRFLFFTSLFFFLTASISAQNNNTKHEECSQPYSCGQYSIYYPFWGGIRPNYCASNDQLKLQCEGNQNTTIQLGSQSFQVLHFDDPVHYTLTMVRTGLIYDHCSSSALTNTSFNSSLFRYSQNVTNITIFYGCPSSVFANRNYSFPCKEDHNMSAFYGDPETARVQDCEGPRIEVQVSKEPVLGEGIEGLNKALSEGFRVHLISEAQVQQCLECVVSNGTCGANDESQFTCFCQDGTEGLDCSDHHSNKWNWERKVGIGVSAAVLGAIVVSIGFYICSRQKKKKNLHAVSSSVQSKETSYSSSIEDTEKGCTYFGVHFFTYSELEEATNFFDPARELGDGGFGTVYFGKLHDGRVVAVKRMYENSYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRAKPGTLAWHTRMNIAIETASALVYLHASEIIHRDVKTNNILLDNHFSVKVADFGLSRLLPTHATHVSTAPQGTPGYVDPEYNEYYQLTDKSDVYSFGVVLIELISSMPAVDISRRRHEINLSNMAIKKIQSGALHEIVDTTLGFETDFKVRKMISAVAELAFQCLQSSKDVRPSMAEVLDRLEDIRSDGSHRSKHEVLDISEDDAALLKNVPPPPSPDSHLVTISNSTPPNDSQ* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0787 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 653 IPR044652 -
Gso8g0787 663 MobiDBLite consensus disorder prediction 633 663 - -
Gso8g0787 663 MobiDBLite consensus disorder prediction 649 663 - -
Gso8g0787 663 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0787 663 ProSitePatterns EGF-like domain signature 1. 239 250 IPR000742 -
Gso8g0787 663 SUPERFAMILY Protein kinase-like (PK-like) 320 614 IPR011009 -
Gso8g0787 663 Gene3D Phosphorylase Kinase; domain 1 310 415 - -
Gso8g0787 663 Pfam Wall-associated receptor kinase C-terminal 169 244 IPR032872 -
Gso8g0787 663 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0787 663 Pfam Wall-associated receptor kinase galacturonan-binding 37 93 IPR025287 GO:0030247
Gso8g0787 663 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Gso8g0787 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 11 653 - -
Gso8g0787 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Gso8g0787 663 Gene3D Transferase(Phosphotransferase) domain 1 416 627 - -
Gso8g0787 663 ProSiteProfiles Protein kinase domain profile. 339 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0787 Gso-Chr8 7231850 7236269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0787 26 662 Receptor kinase-like Gene Family AT1G25390 42.771 3.25e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso8g0787 Pkinase 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0787 - - gmx:100794703 1345.49