Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0776 ATGAAAATTCTAATAATAGCCTCCGCTGTGGCCGCATCGTTGTTTCTATTATTATCATTCATCATCGGATACTTAATCTTCCGATACGTAAGAAGAGGTTCCGCTGCGGAAGATAGCAGCAACCCTGAACCTTCGAGCACGCGCTGCCGCAACTTTTCTTTGACGGAGATAAGAGCCGCCACCAACAACTTCGACGAGGGTTTAATCGTGGGCAAAGGAGGCTTCGGGGACGTGTACAAAGGCCACGTCCGCACGTGTCACAAACCCGTGGCCATCAAGCGCCTCAAACCGGGTTCGGACCAGGGCGCGAACGAGTTCCAGACGGAGATCAAGATGCTCTCGCGCTTCCGCCACGCGCACTTGGTCTCACTCATCGGGTACTGCAACGATGGCGGAGAAATGATCCTCGTCTACGATTTCATGGCGCGTGGGACCCTACGCGACCACTTGTACGGTTCGGAGCTGTCGTGGGAGAGGAGGCTGAACATATGTCTTGAGGCGGCGCGTGGGCTTCACTTCCTCCACGCGGGCGTGGACAAGCAGAGCGTGATACACCGCGACGTGAAGAGCACGAACATCCTGCTGGACAAGGATTGGGTGGCAAAAGTGTCGGATTTTGGGTTGTCGAAGGTGGGGCCCAACGCGTCCCACGTGACGACGGACGTGAAGGGTAGTTTCGGGTATTTGGACCCGGAGTACTACATGAGTCTTTGGTTGACTCAGAAATCCGACGTGTATTCGTTCGGCGTCGTTTTGCTGGAGGTATTGTGTGGGAGGTCCCCCATCGAGACTAAGGTGGACAAGCACAAGCAGTTCTTGGTGACATGGTTCAGGAATTGCTATCATGATGGGAATGTTGATCAGACGGTGGATCCGGCTCTGAAGGGTACCATAGACCCAAAGTGTTTGAAGAAGTTTCTGGAGATTGCGTTGAGTTGTTTGAATGATCAGGGGAAGCAACGGCCCATGATGAGCGATGTTGTGGAAGGGTTGGAGTATGCATTAAATTTACAACAACGTTATAAAAAAAATAAAGGGGAAATAGGGTTGACCAAAATTGAGGATCACCATGGTGACTTTAACGACAAATTTGGGAAAGTGTTATCGATGAACGCGTCTAGCAGCACCAGCATGGCTACGACAACATGCAGTGAAGAGGAACAAGCATTGGTGCATGGGATGTTCCCTGAGCTTCGAAATCAAAGACCACGTTAA 1215 0.5136 MKILIIASAVAASLFLLLSFIIGYLIFRYVRRGSAAEDSSNPEPSSTRCRNFSLTEIRAATNNFDEGLIVGKGGFGDVYKGHVRTCHKPVAIKRLKPGSDQGANEFQTEIKMLSRFRHAHLVSLIGYCNDGGEMILVYDFMARGTLRDHLYGSELSWERRLNICLEAARGLHFLHAGVDKQSVIHRDVKSTNILLDKDWVAKVSDFGLSKVGPNASHVTTDVKGSFGYLDPEYYMSLWLTQKSDVYSFGVVLLEVLCGRSPIETKVDKHKQFLVTWFRNCYHDGNVDQTVDPALKGTIDPKCLKKFLEIALSCLNDQGKQRPMMSDVVEGLEYALNLQQRYKKNKGEIGLTKIEDHHGDFNDKFGKVLSMNASSSTSMATTTCSEEEQALVHGMFPELRNQRPR* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0776 404 Gene3D Transferase(Phosphotransferase) domain 1 141 356 - -
Gso8g0776 404 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Gso8g0776 404 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 34 380 - -
Gso8g0776 404 ProSiteProfiles Protein kinase domain profile. 64 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0776 404 SMART serkin_6 64 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0776 404 CDD STKc_IRAK 70 332 - -
Gso8g0776 404 PANTHER OS07G0166700 PROTEIN 34 380 IPR045272 GO:0004714|GO:0006468
Gso8g0776 404 Pfam Protein tyrosine and serine/threonine kinase 70 330 IPR001245 GO:0004672|GO:0006468
Gso8g0776 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Gso8g0776 404 Gene3D Phosphorylase Kinase; domain 1 48 140 - -
Gso8g0776 404 SUPERFAMILY Protein kinase-like (PK-like) 47 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0776 Gso-Chr8 7103881 7106052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0776 16 404 Receptor kinase-like Gene Family AT3G51550 46.591 4.60e-121 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso8g0776 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0776 - - gmx:100792589 795.808