Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0763 ATGTCAATGGCTGCTCCAAGTTCCCTATTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAGCCTCTTAAAGCTGGTCAAATTGTCCTCAGAGACTCTCCCATTCTGCTGTATTCGGCTTTGCCCTTGGTCAGACAGTCTCTGTCATCCTCCTCCTCCTCTGCCTCCACTTCCTGCTTCTGTGATCACTGCTTCAGAATCTTGTCTCCTTCTTTACAGGGAGATTCTTCATCATCCACAGTTTTGTGCCCCAATTGTCGCCACCATTGTTTCTGCAATTCAAATTGTCTTTCAAATGCACTGAACTCCTCCCATTCTTCTTGGGTATGTCAAGCATTATCTCATCTTAGAGCCAATTCTCTACTGCTTGAACAGCCCCTTGAGCACCAAGTCCAAGTTAATTTTCTTGTTGCTGCCTACAATCTTGCCAATATCTCCCCTTCAGATTTTCAAATTATGCTTTCTCTTCAGGGTTCTCCTGATGATTCCACCATTGCTGCAGCTCAGTTCCTACACCCCCTTATTTCATCCCTCTGCTCACTTGCTCTCATTGGCCCTCAGAATGGATTTTCTTTAGAACTCACGTCTGCTATTCTTGCCAAGGACAAGCTCAATGCCTTCGGCATAATGCAGCCATTCTCTGAACATGATGACCAGAGGTCCGTCAGAGCTTATGGTATTTACCCCTATGCCTCCTTTTTTAACCACGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATGCTAATCCTTCTGATGACAGCCATAATACTGACTTTATTATTAGGATGATTCATGATGTTCCCCAAGGTAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAAATATTCTAGTAGGCAGAAGAGACTGATTGAAGATTATGGCTTCACCTGTAATTGTGATCGATGTAATGTGGAGTCAAATTGGTCAGATAATGATAGTGTTGAAGATAATGCTGAGGAAGAAGAGGAGGTTATGGATGAGGACCAATGTGAAACTATGGCAGCATCAGACACTGATGATCATCCCCATGAAGATAATAACGATTTCCCTCATGCTTATTTCTTTTTAAAATACATGTGTGATAGAACAAATTGCTGGGGAACTTTAGCTCCTTTACCTCCAAAAGGTGATACTCCATGTAATGTCATGGAATGCAATGTCTGTGGCAAATTGAAGAGTGACAATACCTTTGATATTGATGAAGGGCAAGATGAAGTTTCCATGGAGGACTAA 1260 0.427 MSMAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLVRQSLSSSSSSASTSCFCDHCFRILSPSLQGDSSSSTVLCPNCRHHCFCNSNCLSNALNSSHSSWVCQALSHLRANSLLLEQPLEHQVQVNFLVAAYNLANISPSDFQIMLSLQGSPDDSTIAAAQFLHPLISSLCSLALIGPQNGFSLELTSAILAKDKLNAFGIMQPFSEHDDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDANPSDDSHNTDFIIRMIHDVPQGREICLSYFPVNEKYSSRQKRLIEDYGFTCNCDRCNVESNWSDNDSVEDNAEEEEEVMDEDQCETMAASDTDDHPHEDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPKGDTPCNVMECNVCGKLKSDNTFDIDEGQDEVSMED* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0763 419 SMART set_7 8 291 IPR001214 GO:0005515
Gso8g0763 419 CDD SET_SMYD 220 311 - -
Gso8g0763 419 Gene3D - 65 124 - -
Gso8g0763 419 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 415 IPR044238 -
Gso8g0763 419 ProSiteProfiles SET domain profile. 8 285 IPR001214 GO:0005515
Gso8g0763 419 Gene3D - 129 211 - -
Gso8g0763 419 Pfam SET domain 19 284 IPR001214 GO:0005515
Gso8g0763 419 Gene3D SET domain 21 311 IPR046341 -
Gso8g0763 419 Coils Coil 320 340 - -
Gso8g0763 419 SUPERFAMILY SET domain 10 312 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0763 Gso-Chr8 6952465 6955619 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso8g0763 SET 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0763 - - gmx:100783406 806.594