Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0747 ATGCCACAAATGACGAAGTTTTCAACTTTTGCAATTGCGTTCCTTTTGTGTTTTTCTTCTATGCTACTAGTCCTTGGTCAGGTCAACTCAGACAGTGAGAGCATTTTGAGATTGTTGTTGGAAGTGAAGAAATCTTTTGTGCAAGACCAACAAAATGTTCTGAGTGATTGGTCAGAGGATAACACAGACTATTGCAGTTGGAGAGGTGTGTCATGTGAATTGAACTCAAACTCAAACTCAATATCAAACACTTTAGATAGTGACTCGGTGCAAGTAGTAGTGGGTCTCAACCTTTCTGACTCGTCACTCACCGGGTCAATATCACCTTCACTCGGTCTCTTACAAAACCTGCTCCACCTTGATCTCTCCTCCAACAGCCTCATGGGTCCCATTCCACCTAACCTCTCTAAACTCACTTCATTGCAATCTTTGCTTCTCTTCTCCAACCAACTCACGGGTCACATTCCCACTGAGTTGGGCTCGCTCACGAGTCTCCGAGTCATGCGACTCGGTGACAATACACTAACGGGAAAGATTCCCGCGTCTCTTGGGAACCTGGTGAACTTAGTCAACCTCGGCTTGGCTTCCTGTGGACTCACCGGGTCGATTCCGAGGCGATTAGGTAAACTCAGTCTCTTGGAGAATCTGATTCTGCAGGACAACGAGTTGATGGGTCCGATTCCTACAGAGTTGGGGAACTGCTCAAGCCTCACCATCTTCACTGCAGCTAACAACAAACTCAACGGCTCAATCCCGAGTGAACTGGGTCAACTCAGTAATCTGCAAATTCTCAACTTTGCCAACAACAGCTTATCAGGGGAGATTCCGAGCCAACTCGGTGACGTGAGCCAACTCGTTTACATGAACTTCATGGGGAACCAGCTCGAGGGTGCTATTCCACCGTCTCTAGCTCAACTGGGTAATCTTCAAAATCTGGACTTGTCAACGAACAAGCTCAGTGGAGGAATCCCAGAGGAGTTAGGCAACATGGGTGAGTTAGCTTATTTGGTTCTGTCTGGTAACAACCTTAATTGTGTCATACCAAAGACCATATGTTCCAATGCAACAAGTTTGGAGCACTTGATGTTGTCAGAAAGTGGACTTCATGGTGATATTCCAGCTGAGTTGAGTCAGTGCCAGCAACTAAAGCAACTTGATTTGTCCAACAATGCACTCAATGGGTCCATAAATCTTGAGCTTTATGGGTTGCTGGGGCTAACTGATCTTTTGTTGAACAATAACAGCTTGGTTGGTTCCATCTCTCCCTTCATAGGGAACCTCAGTGGTTTGCAGACACTTGCTTTGTTTCACAACAATTTGCAAGGTGCTCTTCCAAGAGAGATTGGAATGCTTGGGAAGTTGGAAATTTTGTATCTTTATGATAATCAATTGTCAGAGGCTATACCTATGGAGATTGGTAATTGTTCTAGTTTGCAAATGGTTGATTTCTTTGGGAACCATTTCAGTGGAAAAATTCCCATCACTATTGGAAGGCTGAAAGAGTTGAACTTTCTTCACCTTAGACAGAATGAGCTTGTGGGTGAGATTCCAGCCACCTTGGGTAATTGTCACAAACTGAACATTCTTGATTTGGCTGACAATCAGCTCTCGGGTGCAATCCCCGCAACGTTTGGATTCCTCGAGGCGTTGCAACAGCTCATGCTCTACAACAATTCTCTTGAAGGTAACCTCCCTCACCAATTGATAAATGTAGCAAACTTGACCAGAGTGAATCTTTCAAAGAACAGATTGAATGGTAGTATTGCTGCATTGTGTAGCTCTCAATCATTTCTTTCTTTCGATGTTACCGAAAACGAGTTTGACGGTGAAATTCCTTCCCAAATGGGGAACTCACCCTCCCTTCAGAGGCTGAGATTGGGTAACAATAAATTCTCTGGTGAAATTCCAAGGACATTGGCAAAAATCCGTGAGCTGTCATTGTTGGACCTCTCAGGAAATTCACTCACTGGACCAATACCAGCTGAGCTTTCTTTGTGCAACAAATTGGCATATATTGATTTAAACAGCAATCTTCTTTTTGGACAAATACCATCATGGCTTGAAAAATTGCCCGAGTTGGGAGAGCTTAAGCTCTCCTCCAATAATTTTTCTGGGCCTCTTCCCTTAGGCCTATTCAAATGTTCCAAATTGCTAGTTCTCTCTCTAAATGATAACTCTCTGAATGGAAGTCTCCCATCTGATATTGGTGATCTTGCATACCTTAATGTCCTCAGACTTGACCACAACAAGTTTTCTGGACCTATCCCTCCGGAGATAGGTAAGTTGAGCAAGATTTATGAGCTCCGGCTCTCTAGAAATAACTTCAATGCTGAGATGCCACCTGAGATTGGAAAACTTCAAAATCTCCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGCCAAATCCCATCTTCTGTTGGGACTCTGTTAAAGTTAGAAGCACTTGATCTTTCCCACAATCAACTCACTGGAGAAGTCCCACCACATATTGGGGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAAGGAAAATTGGATAAGCAGTTCTCCCGCTGGCCAGACGAGGCATTTGAAGGAAACCTACAGCTTTGTGGAAGCCCTCTTGAGCGTTGCCGCCGTGATGATGCTTCTAGGAGTGCAGGCCTAAATGAGTCATTGGTAGCAATTATATCTTCCATTTCAACTTTAGCTGCAATTGCTCTTTTGATACTTGCGGTGAGAATCTTCTCCAAAAACAAGCAAGAATTTTGCTGGAAAGGCAGTGAAGTGAATTATGTTTACTCTTCCTCTTCATCACAAGCACAGAGAAGACCATTGTTCCAACTAAATGCTGCAGGAAAGAGGGATTTCAGATGGGAAGACATCATGGATGCCACGAACAACCTAAGTGATGACTTCATGATTGGTTCAGGAGGTTCAGGCAAAATCTACAAAGCTGAATTGGCCACTGGCGAGACGGTGGCTGTCAAGAAGATTTCATCGAAAGATGAATTTCTGTTAAACAAAAGCTTCATAAGAGAAGTCAAGACACTAGGGAGGATTAGGCATAGACATCTTGTGAAGCTAATAGGATATTGTACCAATAAAAACAAAGAAGCAGGTTGGAATTTGCTGATATATGAGTACATGGAGAATGGGAGTGTATGGAATTGGCTTCATGGGAAACCAGCCAAGGCAAACAAAGTAAAAAGGAGCATTGATTGGGAGACAAGGTTCAAAATTGCTGTGGGATTGGCTCAAGGAGTGGAGTACCTCCATCACGATTGTGTCCCAAGGATCATTCACAGGGACATCAAATCCAGCAACGTGTTGCTAGATACCAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAAGCACTAACTGAGAATTGTGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATAGCTCCAGAGTATGCATACTCGCTACATGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATAGTGCTTATGGAACTTGTTAGTGGTAAAATGCCAACAAATGATTTTTTTGGAGCTGAGATGGACATGGTGAGATGGGTGGAAATGCACATGGATATACATGGCTCTGCACGTGAGGAATTGATAGATCCTGAGCTGAAACCTCTTTTACCTGGCGAAGAGTTTGCTGCATTCCAAGTGCTTGAGATAGCCTTACAGTGCACAAAAACTACACCACAAGAGAGGCCATCTTCAAGGAAAGCATGTGATCGTCTCCTCCATGTATTCAACAACAGGACAGTGAACTTTGAGAAGATGAATTTGGATCATTACAAATGA 3828 0.4339 MPQMTKFSTFAIAFLLCFSSMLLVLGQVNSDSESILRLLLEVKKSFVQDQQNVLSDWSEDNTDYCSWRGVSCELNSNSNSISNTLDSDSVQVVVGLNLSDSSLTGSISPSLGLLQNLLHLDLSSNSLMGPIPPNLSKLTSLQSLLLFSNQLTGHIPTELGSLTSLRVMRLGDNTLTGKIPASLGNLVNLVNLGLASCGLTGSIPRRLGKLSLLENLILQDNELMGPIPTELGNCSSLTIFTAANNKLNGSIPSELGQLSNLQILNFANNSLSGEIPSQLGDVSQLVYMNFMGNQLEGAIPPSLAQLGNLQNLDLSTNKLSGGIPEELGNMGELAYLVLSGNNLNCVIPKTICSNATSLEHLMLSESGLHGDIPAELSQCQQLKQLDLSNNALNGSINLELYGLLGLTDLLLNNNSLVGSISPFIGNLSGLQTLALFHNNLQGALPREIGMLGKLEILYLYDNQLSEAIPMEIGNCSSLQMVDFFGNHFSGKIPITIGRLKELNFLHLRQNELVGEIPATLGNCHKLNILDLADNQLSGAIPATFGFLEALQQLMLYNNSLEGNLPHQLINVANLTRVNLSKNRLNGSIAALCSSQSFLSFDVTENEFDGEIPSQMGNSPSLQRLRLGNNKFSGEIPRTLAKIRELSLLDLSGNSLTGPIPAELSLCNKLAYIDLNSNLLFGQIPSWLEKLPELGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLPSDIGDLAYLNVLRLDHNKFSGPIPPEIGKLSKIYELRLSRNNFNAEMPPEIGKLQNLQIILDLSYNNLSGQIPSSVGTLLKLEALDLSHNQLTGEVPPHIGEMSSLGKLDLSYNNLQGKLDKQFSRWPDEAFEGNLQLCGSPLERCRRDDASRSAGLNESLVAIISSISTLAAIALLILAVRIFSKNKQEFCWKGSEVNYVYSSSSSQAQRRPLFQLNAAGKRDFRWEDIMDATNNLSDDFMIGSGGSGKIYKAELATGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLIGYCTNKNKEAGWNLLIYEYMENGSVWNWLHGKPAKANKVKRSIDWETRFKIAVGLAQGVEYLHHDCVPRIIHRDIKSSNVLLDTKMEAHLGDFGLAKALTENCDSNTESNSWFAGSYGYIAPEYAYSLHATEKSDVYSMGIVLMELVSGKMPTNDFFGAEMDMVRWVEMHMDIHGSAREELIDPELKPLLPGEEFAAFQVLEIALQCTKTTPQERPSSRKACDRLLHVFNNRTVNFEKMNLDHYK* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0747 1275 Gene3D Ribonuclease Inhibitor 545 882 IPR032675 -
Gso8g0747 1275 SUPERFAMILY RNI-like 96 393 - -
Gso8g0747 1275 Pfam Leucine rich repeat N-terminal domain 38 72 IPR013210 -
Gso8g0747 1275 SUPERFAMILY Protein kinase-like (PK-like) 953 1255 IPR011009 -
Gso8g0747 1275 SUPERFAMILY L domain-like 629 875 - -
Gso8g0747 1275 ProSitePatterns Protein kinases ATP-binding region signature. 975 998 IPR017441 GO:0005524
Gso8g0747 1275 PRINTS Leucine-rich repeat signature 382 395 - -
Gso8g0747 1275 PRINTS Leucine-rich repeat signature 811 824 - -
Gso8g0747 1275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1100 1112 IPR008271 GO:0004672|GO:0006468
Gso8g0747 1275 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 5 1271 - -
Gso8g0747 1275 Gene3D Phosphorylase Kinase; domain 1 929 1049 - -
Gso8g0747 1275 Gene3D Ribonuclease Inhibitor 324 544 IPR032675 -
Gso8g0747 1275 Gene3D Ribonuclease Inhibitor 33 323 IPR032675 -
Gso8g0747 1275 SMART serkin_6 969 1259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0747 1275 ProSiteProfiles Protein kinase domain profile. 969 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0747 1275 Gene3D Transferase(Phosphotransferase) domain 1 1050 1273 - -
Gso8g0747 1275 SMART LRR_typ_2 210 234 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 762 786 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 258 282 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 451 475 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 690 714 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 306 330 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 114 137 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 138 162 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 499 523 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 642 666 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 835 866 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 811 833 IPR003591 -
Gso8g0747 1275 SMART LRR_typ_2 547 571 IPR003591 -
Gso8g0747 1275 Pfam Protein kinase domain 974 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0747 1275 Pfam Leucine Rich Repeat 813 833 IPR001611 GO:0005515
Gso8g0747 1275 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515
Gso8g0747 1275 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
Gso8g0747 1275 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 1271 - -
Gso8g0747 1275 SUPERFAMILY L domain-like 352 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0747 Gso-Chr8 6839452 6844163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0747 25 715 Receptor kinase-like Gene Family AT1G17750 35.294 3.90e-95 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso8g0747 Pkinase 6.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0747 - - gmx:100785174 2392.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1147 5 34664147 34669039 Gso8g0747 8 6839452 6844163 GST