Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0741 ATGAGTGCTTCAAAATCAGGTGGTGGATCAGGTCGTGGTCAACAAGGTGATTACCATTGGCGTAATCGTCATGGTCGCGATAAGGTTGCTAGACTTGAGGAAATATTCAAGGAATGCACACATCCAAATGAAGTGCGACGCCGTCAAATAGGCGAGGAGCTCGGGCTTGATCCTGAACAAACTATAAATGAGCGATTAGATACAGATGCTCTTCGGCTTGAGAATGAAAGGATACAATCGGAAAACAACAAAATGAGAGAGACTTTGGAGAATCTTTCATGCGGATCTTGTGGGGGTCGAGCCATGGAACCAGTAAAGCATCAACTTTCCTTGCAAGTCTTAAGGGGGGAAAATATTCTATTAACTAAAGAGTGCGAGAGGATAACCTCACTTATGGCAAAAAATGGGATAAATATTAATCCAGCACTACTTCCTGTCCTTCCTTCTTCTTCATCACATGATGCCTTAGGAGGAAGTTTACTAAATCAACCAGTTGGAATTCCTGCTCATAATCAATTCATTTCTAACCATGATAACCATTATATTCCTGCCGCAATTCCAACTCCTTTTCAGGATAATCCTATTGTTAGCCCTCCTAGCCATAATCAAGACATTAACCCTGCTCCTACCATTGATCAACACATTCCTACTCTTGATGATCCCACTCTCATTGGAGATAATTCTCCTTTGATTTCAAGTTTTGATTATAATATTCCAGCTTTGGTTACTGCTCTTGATCGAAATCTTCCCGCAATGATTCATCCTCACGATCAAAATAATAGCATTCCTTCCGCTGAGAAAGAAATTCATCAAGTGTCTAACAATTCAAACAATAACCTTTCTGCTCTAGAGTTGGATGCAGTTCAAATTCTAAACAATGATATGTTACCCCAACCAATGAAGAGCCTAATTAAAGATATGGATAGTGTACAAATGTTGAAGATTGCAGAAGATGCAATGGAAGAATTGATGAAACTTCTCAGTTTGAACGAGCCCTTCTGGTTTAGATCTTTACTAGATGGGAAATTCAATCTTCGGCATGATTGCTACAAAAGGATATTTGGTAGGAGCAATTGCTTAAGTGGACCTCATGTACGAATGGAATCGTCGAAAGATTCACGAGTTGTGAAAATGAGTGGGGCACAACTCGTTGAAATGTTCTTAAATTCGGACAAATGGGTTGATCTATTCCCAACAATTGTTAAAAAAGCTCAAACAATTCAAGTACTTGAAAGTGGTTCATCAGGAAACAGAAATGGAGCTCTACAGTTGGTGAATGCAGAAATGCACATTCTTTCACATTTGGTTCCAAGTCGGGAATTTCTCTTCCTTCGTTATTGTAAACAAATTGAAGTAGGTATATGGGTCATAGGGGATGTGTCAATTGATTCTTCAACATACAAAACTACTGTTTCTCACGCTCGAAAGCTTCCATCTGGATGCCTGATTCAAGAAAAGTCGTCTGAGGGATTGTGCATGGTTTCATGGATGGAGCACGTGGAAGTGAATGAAAAGATGCAAACCCACAATCTTTTCAGAGATGCTATTTGTGGGAATAACGCATATGGAGCAGACAGATGGGTTATGACCCTTGAAAGAATGTGCGAAAGGTTTGCAAGCTACTCAGCTAAAACTATACCTAGTTGTGAGACTGGAGGAGTTGTTAGATCGCCCGACGTAAAAAGAAACATAATGCACCTAACGCATCGTATGGTGAAAATGTTTTGTGGGAATTTGGACATGCAAGACAATCCAAATTTCCCAAATTTAACCCGGATGAACAACAATGGGGTTAAGTTATCCATTCGCGTGAATCACACAGGGCCAAATGAGCCTAAAGGCACGATCATTGGTGCTGCTACCTGCTTTCGGGTTCCACTCTCTCCACAAATTGTTTTCGATAACTTGATAGACAACAACAAACGAGCCAAGTGGGATACTCTATGCGATGGAAGTGCAGGGCACGAGATTCAACGAATCTCAACTGGAAGCAATCCTGGAAATTGTATTTCAATCATGCGGCCTTTCATCCCTAAAGAGAACAATATGGTGATTCTCCAAGAAAGTTATGTAGATGCTTTGGGATCCATGTTGGTATTCGCTCCTTTTTATATGGAAGGATTGGATTTGATCATGAAGGGAGAAGACACATCACTGTTTCCGATTCTTCCCTCTGGCCTTACCATATCTTGGGATTACCAATCAAATAAAGTTCCTGAAGGACAATCTGGACAAGTTGGTCAATCAAGAGGTTCGTTGGTGACTCTAATGTTTCAACTTTTGGCATCCAGTACATCTAAAATAGATAATGTAGACATGAAATTAATAGGTTCTATTAATACACTCGTGACCTCAACTGTGGAGAAAATTAAAGATGCTTTGAATTGCTCAAATTCGAAGTAA 2403 0.4003 MSASKSGGGSGRGQQGDYHWRNRHGRDKVARLEEIFKECTHPNEVRRRQIGEELGLDPEQTINERLDTDALRLENERIQSENNKMRETLENLSCGSCGGRAMEPVKHQLSLQVLRGENILLTKECERITSLMAKNGININPALLPVLPSSSSHDALGGSLLNQPVGIPAHNQFISNHDNHYIPAAIPTPFQDNPIVSPPSHNQDINPAPTIDQHIPTLDDPTLIGDNSPLISSFDYNIPALVTALDRNLPAMIHPHDQNNSIPSAEKEIHQVSNNSNNNLSALELDAVQILNNDMLPQPMKSLIKDMDSVQMLKIAEDAMEELMKLLSLNEPFWFRSLLDGKFNLRHDCYKRIFGRSNCLSGPHVRMESSKDSRVVKMSGAQLVEMFLNSDKWVDLFPTIVKKAQTIQVLESGSSGNRNGALQLVNAEMHILSHLVPSREFLFLRYCKQIEVGIWVIGDVSIDSSTYKTTVSHARKLPSGCLIQEKSSEGLCMVSWMEHVEVNEKMQTHNLFRDAICGNNAYGADRWVMTLERMCERFASYSAKTIPSCETGGVVRSPDVKRNIMHLTHRMVKMFCGNLDMQDNPNFPNLTRMNNNGVKLSIRVNHTGPNEPKGTIIGAATCFRVPLSPQIVFDNLIDNNKRAKWDTLCDGSAGHEIQRISTGSNPGNCISIMRPFIPKENNMVILQESYVDALGSMLVFAPFYMEGLDLIMKGEDTSLFPILPSGLTISWDYQSNKVPEGQSGQVGQSRGSLVTLMFQLLASSTSKIDNVDMKLIGSINTLVTSTVEKIKDALNCSNSK* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0741 800 MobiDBLite consensus disorder prediction 1 24 - -
Gso8g0741 800 SMART START_1 314 537 IPR002913 GO:0008289
Gso8g0741 800 Pfam START domain 315 537 IPR002913 GO:0008289
Gso8g0741 800 SUPERFAMILY Bet v1-like 558 705 - -
Gso8g0741 800 ProSiteProfiles START domain profile. 305 540 IPR002913 GO:0008289
Gso8g0741 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 189 796 - -
Gso8g0741 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 15 127 - -
Gso8g0741 800 Gene3D - 314 516 IPR023393 -
Gso8g0741 800 CDD homeodomain 21 60 IPR001356 GO:0003677
Gso8g0741 800 CDD START_ArGLABRA2_like 310 536 - -
Gso8g0741 800 Coils Coil 63 95 - -
Gso8g0741 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 189 796 IPR042160 -
Gso8g0741 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 15 127 IPR042160 -
Gso8g0741 800 SUPERFAMILY Bet v1-like 306 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0741 Gso-Chr8 6796214 6802699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0741 292 795 Homeobox Transcription Factor Family AT1G73360 41.440 1.65e-116 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0741 K09338 - gmx:100783586 1565.82