Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0740 ATGTATCCTTCAAACTTGGGTGGTTCAGGTCGTGGTAATCGTCTCAATCATGCTACGGCTATAAGTGAGCGAATAGATAACAATGCTCTTCGGCGTGAGAATGAAAACATACAATCAGAAAACCTATTAATGAGAGAGTCTCTGCAGAATGCATTCTGCTTATCTTGTGGGGGTCTACCCGTGGGATCAGTAGAGCGAAAACTTCAATTGCAATCATTAAAGGCAAAAAATATTCAATTAGCTAAAGAGTATGAGAGAGTGTATGCACTTTTGGAAAACAATGGGGTAAATACGGATCTACCACTTCCTTCTTCTTCTTCATATGATACCTCAGGAGGAAGATTGCTAAACCCAATAGTTGGACTTCCTTCTCCTTATCAACATAGTCATGTTCTTAGTACTCCTGGTTTCAATCAAGATATTCCTGCTCCAGCTCCTGCTCTTGATTGCTATATTCCTGATCCTCCTAGTGATGATGTTGCACTTGATTATTGTATTCCTACTCCTGCTAGTGTTCTTGCGGTTGATCACTCTATTCCAGCTCTTGCTAGTGATCCTTGGCTTGGTCAAGATATTCCTCATCTTCCCACTCTTGCCACATTGGATCAAGATATTCCACCTCTTGGTCAAGATACTTCTACCCTTCCTCAGGATCATATGCCCAAGGATCTTGATCAAGAATTGGATGCATTGCGCGGAATTTTGAACAATGATTTGATATTCCAATCTATCATTAACCAAAGGATAGACCTGGACAATGCAATGATGTCACAAATTGCAAATAATGCAATCGAAGAGTTAATTAAGCTTTTGGATATGAACCAACCCTTCTGGTCTATACATGACTGGAAGTTAGTTCTTAAACGTGATAATTACCAAAGCATACTTGGTAGGAGACATTGCTTACCTGGACCTCATGCACGGATAGAATCCTCAAAAGATTCACGAATAGTGGACATGAATGCGGAACAACTTGTTCAAATGTTTATGAATTTGGAAAAATGGGTTGATCTGTTCCCAACAATTGTTACAAAAGCCCAAACAATTCAAGTACTCGAAAACGGTTTGGTAGGAAATCGAAGTGGAGCTTTGTTGTTGATTAATGCAGAAATGCACATTCTTTCACATTTGGTTCCAACTCGACAATTCTACTTCCTTCGTTATTGTAAACAAATTAAAGAAGGTGTGTGGGTGATAGGGGATGTGTCAATTGATTCCTTAGAATACAAAACCATTGTTCCTCGCATTTGGAGGCGTCCATCTGGATGCCTCATTCAAGAAATGAATCACGGATTGTGCAAGGTTTCTTGGGTGGAGCACGTGGAAGTGGATGATAAGATGCAAACTCACCAGCTTTTCACTGATGTTATTTGTTGCAATAATGCATATGGAGCAGAAAGATGGCTTTCGACACTTAAAAGAATGTGTGAGAGATTTGCATGCGCTTCAGCTGAAACTATACCCAGTTGTGACGAGTCTGGAGAAGCCATTTTATCACTTGAAGGAAAGAAGAGTGTGATGCACTTGGCTCATCGAATGGTTAAGACTTTTTGCCGCACTTTAGACGTGTCAGATTGTGAGAACTTCCCATATTTAACGAGGATGATGAATAATGGTGAGGTTACAATAATTGTTCGCAAGAATAACTCAGAACAAGATGTGCCACAAGGCTTGATTCTCAGTGCTGCTACCTCTTTTCTACTTCCGCACTCTCCAGAAAATGTTTTTGACTTCTTGATAGACAACAAGAAACGAGCTAAGTGGGAACCTTTTTGGTATGGAAAGCCAGGGCACGAGATTCAACGCATCTCAACTGGAAATAATCCAGGAAATTTCATTTCAATTACGAAGGCTCTTGGCCCCAGTGATAACAATATGATAGTTCTTCAAGAAAGTTATGCAGATGGTTTGGGATCTATGATGGTATACTCAGCTTTTGATACGGAGACAATGAATTTTGCCATGAGGGGAGAAGACACGTCACAGTTGTTGGTTCTTCCCTCTGGCTTTACCATATCTGGGGATGGTCATTCAAATGCTTTTGAAGGACAATCTAGACAAGTGGTGTCAAAAGGTTCATTGGTTACTCTAATGTTACAAGTTCTAGCTTCTAGTACTCCTAGCATGGACATGATAGACATGGAATTTGTAGGTTCTGTCACTACACTTGTGTCCTCAACAGTGGAGAAAATTAAAGCTGCTTTGAATTGTTCCAATTAA 2220 0.4014 MYPSNLGGSGRGNRLNHATAISERIDNNALRRENENIQSENLLMRESLQNAFCLSCGGLPVGSVERKLQLQSLKAKNIQLAKEYERVYALLENNGVNTDLPLPSSSSYDTSGGRLLNPIVGLPSPYQHSHVLSTPGFNQDIPAPAPALDCYIPDPPSDDVALDYCIPTPASVLAVDHSIPALASDPWLGQDIPHLPTLATLDQDIPPLGQDTSTLPQDHMPKDLDQELDALRGILNNDLIFQSIINQRIDLDNAMMSQIANNAIEELIKLLDMNQPFWSIHDWKLVLKRDNYQSILGRRHCLPGPHARIESSKDSRIVDMNAEQLVQMFMNLEKWVDLFPTIVTKAQTIQVLENGLVGNRSGALLLINAEMHILSHLVPTRQFYFLRYCKQIKEGVWVIGDVSIDSLEYKTIVPRIWRRPSGCLIQEMNHGLCKVSWVEHVEVDDKMQTHQLFTDVICCNNAYGAERWLSTLKRMCERFACASAETIPSCDESGEAILSLEGKKSVMHLAHRMVKTFCRTLDVSDCENFPYLTRMMNNGEVTIIVRKNNSEQDVPQGLILSAATSFLLPHSPENVFDFLIDNKKRAKWEPFWYGKPGHEIQRISTGNNPGNFISITKALGPSDNNMIVLQESYADGLGSMMVYSAFDTETMNFAMRGEDTSQLLVLPSGFTISGDGHSNAFEGQSRQVVSKGSLVTLMLQVLASSTPSMDMIDMEFVGSVTTLVSSTVEKIKAALNCSN* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0740 739 ProSiteProfiles START domain profile. 249 481 IPR002913 GO:0008289
Gso8g0740 739 Coils Coil 27 47 - -
Gso8g0740 739 Gene3D - 256 456 IPR023393 -
Gso8g0740 739 SUPERFAMILY Bet v1-like 250 479 - -
Gso8g0740 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 84 IPR042160 -
Gso8g0740 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 125 737 IPR042160 -
Gso8g0740 739 Pfam START domain 259 478 IPR002913 GO:0008289
Gso8g0740 739 SUPERFAMILY Bet v1-like 502 702 - -
Gso8g0740 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 16 84 - -
Gso8g0740 739 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 125 737 - -
Gso8g0740 739 SMART START_1 258 478 IPR002913 GO:0008289
Gso8g0740 739 CDD START_ArGLABRA2_like 254 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0740 Gso-Chr8 6788978 6795012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0740 13 90 Homeobox Transcription Factor Family AT1G73360 41.026 6.71e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0740 K09338 - gmx:100783053 1476.07