Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0739 ATGAGTACAGGAGACAGGCCAAAAATGCATGATCAAACCGGTTGCTTTGATCCCAACACAACGGGAGAAAGTGTACCCTCTCTGAAGGATAACTTTCCTCAAACTCTACCTCCTTCATCACCTATGGTTGTTGTAGGAAACACCACCACAAACAGCATCAATAATAGCCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAGCTCTCCTGTAACCATCACAATCCACAACACCAACAAGATCATGTCTCCACTTATGCAAGTGGAGTAACTGCCACATCTATTGAAATCCCACTTCCACAGCATCTTGGTTTGAACATGGGAAACTCCTACATCAACAACAACAACAACATGGATAATCATTTGGTGCAAGAGGTCATTGATGCATTTCCCTATCAGCAGTCCACTTGGGACCCTACTATTGTTCAGGAATTACAAGACATGGCCTATGCTAATCACACAGAACAAACACAACAGCAACAACAAAATGAACAACAATTTCAGCAATTTGAGACTCAAAACTGCAGCCAAAGCTACAACAACCCCTCTTCCATACTAGACCCTCCTTACCCTTCACCAGATCTCCTAAACCTTCTCCACATGCCAAGATGCTCAGCCTCATCTTTGCTCACCAATCCCTCCATTTGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAATCCAATGGCCTTTCTTGGAGATCTTCCCATAGGATCAGAAAACACAAGTGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCTTCCTCCTCAGCCTCCAGCACTCAGAGAGCTGTTTCAGTCTCTCCCCCGCGGCTATAGCTTGCCAACAAACTCGAGGAATGGCTCACTCTTTGGTGGAGGGGATGAGATGGAGGGTGATGGAAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACTCACACCTTCTGTTGGCAAAGGAAGGAGAGGCAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAACTCAATGGAAAATACAAAATCTTGAGGAATCTCATCCCAAGCCCCACCAAGACTGATAGAGCATCTGTGGTGGGGGATGCCATTGACTATATAAGGGAGCTGATTAGAACAGTCAATGAGCTCAAACTACTGGTGGAGAAGAAAAGATATGCGAAGGACAGGTGCAAGAGGCCCAAAACAGAGGAAGATGCTGCTGAGAGCTGCAACATTAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGCGAGGTTGATGTCCGTATCATCGACGACGATGTCACAATCAAACTCTTCCAGAGGAAGAAGATCAACTGCCTGCTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGCTGGAGCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATGGAAGGTTCTTCAGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTCTGGACAGTCAGTACGCAGCAGCAGTTCCACATACAAACAGCTATTAG 1566 0.4572 MSTGDRPKMHDQTGCFDPNTTGESVPSLKDNFPQTLPPSSPMVVVGNTTTNSINNSLEENLRLSVEELSCNHHNPQHQQDHVSTYASGVTATSIEIPLPQHLGLNMGNSYINNNNNMDNHLVQEVIDAFPYQQSTWDPTIVQELQDMAYANHTEQTQQQQQNEQQFQQFETQNCSQSYNNPSSILDPPYPSPDLLNLLHMPRCSASSLLTNPSICLTNPTQNTPNFQNPMAFLGDLPIGSENTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFGGGDEMEGDGSQLDMGVLEFNRVTLTPSVGKGRRGKATKHFATEKQRREQLNGKYKILRNLIPSPTKTDRASVVGDAIDYIRELIRTVNELKLLVEKKRYAKDRCKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIMEGSSVYASAIANRVIDVLDSQYAAAVPHTNSY* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0739 521 MobiDBLite consensus disorder prediction 157 177 - -
Gso8g0739 521 Pfam Helix-loop-helix DNA-binding domain 326 372 IPR011598 GO:0046983
Gso8g0739 521 SMART finulus 329 378 IPR011598 GO:0046983
Gso8g0739 521 PANTHER TRANSCRIPTION FACTOR BHLH91 9 520 - -
Gso8g0739 521 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 385 IPR036638 GO:0046983
Gso8g0739 521 CDD bHLH_AtMYC1_like 328 387 IPR045896 -
Gso8g0739 521 Gene3D - 320 395 IPR036638 GO:0046983
Gso8g0739 521 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 372 IPR011598 GO:0046983
Gso8g0739 521 MobiDBLite consensus disorder prediction 1 39 - -
Gso8g0739 521 MobiDBLite consensus disorder prediction 14 39 - -
Gso8g0739 521 PANTHER TRANSCRIPTION FACTOR BHLH91 9 520 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0739 Gso-Chr8 6780891 6783389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0739 9 521 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 36.571 1.34e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso8g0739 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0739 - - gmx:100782512 992.645