Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0729 ATGGCTGAAACTCCATCACCCTCTGAGTCTCCCACAGCCTCCTTTGGCCCCATCATAAGTAATGGCCAAGTTGGTGGCTTCGATTGGATTGTCCTTGTGGCAGCAATTTTATGTGCCTTTGTGTGTGCTCTTGGCCTCAACACAATGTTACAATGTGTGTTTCAATGTGCTTGTCGTGTCCTCACAGAGCCTCGCCAATGGATTGCTTCACGAAGGCTCAACTCTGGCCTCAAGAAAAAGGAAATGGTGGCTTTGCCAACCTCAACTTACACTACTACACACTCTGCTGCTGCCTCTTCTTCTTCTTCACCTAATTCTAGTAGTTGTGTCATTTGCTTGGCTGAGTTCTCTGATGGGGACCCTATAAGGTTCCTTCCAAAGTGCAACCACTATTTCCATGTGGTTTGCATTGACAAGTGGCTACTCTCTCACTCTTCTTGCCCTACTTGCAGGCACCTCCTCAAGTCAAATGATTCTCTTCACTCCTTACATATTGTCATAGCTTAG 507 0.4655 MAETPSPSESPTASFGPIISNGQVGGFDWIVLVAAILCAFVCALGLNTMLQCVFQCACRVLTEPRQWIASRRLNSGLKKKEMVALPTSTYTTTHSAAASSSSSPNSSSCVICLAEFSDGDPIRFLPKCNHYFHVVCIDKWLLSHSSCPTCRHLLKSNDSLHSLHIVIA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0729 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 156 IPR013083 -
Gso8g0729 168 PANTHER OS06G0666500 PROTEIN 24 163 - -
Gso8g0729 168 Pfam Ring finger domain 108 151 IPR001841 -
Gso8g0729 168 SMART ring_2 109 150 IPR001841 -
Gso8g0729 168 SUPERFAMILY RING/U-box 108 157 - -
Gso8g0729 168 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Gso8g0729 168 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0729 Gso-Chr8 6724644 6725602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0729 28 154 C3H Transcription Factor Family AT2G17450 43.077 4.18e-34 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1135 5 34583691 34584587 Gso8g0729 8 6724644 6725602 GST