Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0726 ATGATGGAGATGAATATATTGGCTTCTTCGTTCTCTAGTTATGCAAAACCCTTTGTAAGAGTAAACCCTTCTCTTCTTACGCTCAGGGCATCTTCTCTGCGCCATGACTACCCTCTTGCAAGCAAAATTGTTGTCAAAAATTTACCATATTCTACCGGTGAGACTACTTTGCAGAAGGAATTTTCAAATTTTGGCAAGATAGCTGAAGTTAAAATGGTTAAAGATATGAACACAAAAAGATCTAAGGGTATTGCTTTCATTCAATATACATGTCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTCGAACAATCGGCGTGGAAATTGCAAGACTGGGTTGGGATGATTTTGGTGCATCCCCAAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCAGAGCAAGGGGAAGTGGTAGATTGCTGGTACTGA 453 0.415 MMEMNILASSFSSYAKPFVRVNPSLLTLRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWDLPEQGEVVDCWY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0726 150 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 19 143 - -
Gso8g0726 150 Gene3D - 29 143 IPR012677 -
Gso8g0726 150 SMART rrm1_1 42 115 IPR000504 GO:0003723
Gso8g0726 150 SUPERFAMILY RNA-binding domain, RBD 31 121 IPR035979 GO:0003676
Gso8g0726 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Gso8g0726 150 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 19 143 - -
Gso8g0726 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0726 Gso-Chr8 6705478 6708648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0726 41 122 Eukaryotic Initiation Factors Gene Family AT2G36660 34.146 2.39e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0726 - - gmx:100305971 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1132 5 34562395 34565897 Gso8g0726 8 6705478 6708648 GST