Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0717 ATGGTGAAAGGTCGTCAAGGAGAGCGCGTCAGACTCTACGTGAGGGGTACAATCCTTGGATACAAAAGGTCCAAGTCCAACCAGTACCCAAACACATCCCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAAGTAGGATGGTATGCTGGCAAGAAAATGGCCTATATCTACAAGGCTAAGGTGAAAAAGGATGGAAGCCATTACCGCTGCATATGGGGCAAGGTTACGAGGCCTCACGGCAACAGTGGTGTTGTCCGTGCAAAATTCAAGTCAAACCTTCCACCCAGATCGATGGGAGCTCGAGTAAGAGTATTCATGTATCCAAGTAATATATGA 339 0.469 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKKMAYIYKAKVKKDGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARVRVFMYPSNI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0717 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso8g0717 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Gso8g0717 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Gso8g0717 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso8g0717 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
Gso8g0717 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Gso8g0717 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0717 Gso-Chr8 6637049 6639218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0717 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.071 1.07e-74 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0717 K02917 - gmx:100305958 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1123 5 34484169 34486234 Gso8g0717 8 6637049 6639218 GST