Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0706 ATGGCCGACGATCCAATGCCCACGCGCTGGTCTTTCCAGGACTTCAAATTGTGTTATGATGCTAAGTTTGGTAGAAAGAAAGTCGCGGAGAACGGAGATGATGCTGCCGGTAAAGCGGTCAGCAATGGAAATGGAAATTCAGTGACAGTGGCCATTGTGTCCAATGGCAACAAAAGGGCATCGGAAATGGCTGTTTATGAGCAGTTTCGAAGCGAGGGGCAGAATCAGATTCACACAAATGGCTTTGTGCCGACCCTTACAGATGAAAGGCCGCAGAAGTCTTTGCTTCCACCCTTTGAATCTGCGGAAATGCGAGCTTTAGCAGAGAGCTTAAGTAGGGATATCATTCGTGGAAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCGATTAAGTATCCCAAGTACTTCACTGGTCTGTTATCACCATGGAAGGGTATCCTCCTTTTTGGCCCACCGGGGACAGGAAAGACAATGCTTGCAAAGGCAGTTGCGACAGAGTGCAATACAACTTTTTTTAATATTTCAGCCTCATCTGTAGTCAGCAAATGGCGAGGTGATTCAGAGAAGTTAGTGAAAGTGTTATTTGAACTTGCAAGGTATCATGCACCCTCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGTGGTGAAGCTCGCAGTGAACACGAAGCTAGTAGACGGTTGAAAACAGAGCTTCTCATTCAGATGGATGGTTTGACAAAGACAGATGAACTGGTTTTTGTTTTAGCGGCAACAAATCTTCCCTGGGAACTGGATGCAGCCATGCTTCGACGTCTTGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGTTGCGAGAAGAGCAATGTTCGAGGAACTCCTTCCTCAACAGCCTGGCGAGGAATCGATCCCCTATGATATACTGGAGGATAAGACAGAAGGATATTCGGGATCGGATATCCGATTACTCTGTAAAGAGACAGCAATGCAACCCTTAAGACGCTTAATGTCACAACTTGAGCAGAACCAGGATGTGGTGCCTGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGATCTGAAGATATAGAGACAGCTTTGAGAAACACAAGGCCATCTGCTCATCTCCATGCCCACAAATATGACAAGTTCAATGCTGATTATGGTAGTCAAATACTACAATGA 1218 0.454 MADDPMPTRWSFQDFKLCYDAKFGRKKVAENGDDAAGKAVSNGNGNSVTVAIVSNGNKRASEMAVYEQFRSEGQNQIHTNGFVPTLTDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLVKVLFELARYHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQPGEESIPYDILEDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQNQDVVPEEELPKVGPIRSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0706 405 SMART AAA_5 157 294 IPR003593 -
Gso8g0706 405 Pfam ATPase family associated with various cellular activities (AAA) 161 291 IPR003959 GO:0005524|GO:0016887
Gso8g0706 405 PANTHER AAA DOMAIN-CONTAINING 9 403 - -
Gso8g0706 405 CDD AAA 128 292 - -
Gso8g0706 405 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 403 - -
Gso8g0706 405 Gene3D - 120 395 IPR027417 -
Gso8g0706 405 Gene3D - 293 381 - -
Gso8g0706 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 386 IPR027417 -
Gso8g0706 405 Pfam AAA+ lid domain 323 353 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0706 Gso-Chr8 6491215 6498342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0706 155 364 Calmodulin-binding Proteins AT3G56690 35.681 1.97e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0706 K07767 - gmx:100813164 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1110 5 34314577 34322623 Gso8g0706 8 6491215 6498342 GST