Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0700 ATGTCAATGGCTGCGACTCTCACTGCTGTAAGAATTCCCACTTTCCACCAACGCCATCTCAAAAAACATTTCACTGCACCTTCTTCTTCCTTACGCCTCCTCAATCTCGCAAAGATGGAAGGAAGTGAGATCAGTGAGCAAGTGGGAGAGGATTTGGGAGCAAAGAAGAAAGTTTTTGTAGCTGGAGCCACTGGTAGCACCGGCAAAAGAATCGTTGAGCAGTTACTCGCAAAGGGCTTTGCTGTTAAGGCTGGGGTTAGAGACGTCGACAAGGCCAAGACAACCCTTTCATCTGCCAACCCTTCTCTTCAAATTGTGAAAGCTGATGTCACAGAGGGTTCTGATAAGCTAGCTGAGGCCATTGGTGATGATTCAGAAGCAGTAGTGTGTGCCACAGGCTTTCGCCCGGGGTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTTGGCACAGTAAACCTCGTTGAAGCATGCAGGAAACGTAATGTTAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCTGCTATGGGACAATTATTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAAATATATCAGGAAATCCGGTATAAACTACACAATAATAAGACCTGGTGGGTTGAGAAACGATCCTCCTACTGGAAATATAGTTATGGAGCCTGAGGACACCCTTTATGAAGGTTCCATATCCAGATCTTTAGTTGCTGAAGTGGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAAATAGTGTCTCGCCCTGATGCTCCTAAACGCCCGTACCATGACCTTTTTGGATCCATAAGGCAACAATAA 873 0.4479 MSMAATLTAVRIPTFHQRHLKKHFTAPSSSLRLLNLAKMEGSEISEQVGEDLGAKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDVDKAKTTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLFNPAYIFLNVFGLTLVAKLQAEKYIRKSGINYTIIRPGGLRNDPPTGNIVMEPEDTLYEGSISRSLVAEVAVEALAYPEASYKVVEIVSRPDAPKRPYHDLFGSIRQQ* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0700 290 PANTHER - 39 290 - -
Gso8g0700 290 PANTHER FLAVIN REDUCTASE-RELATED 39 290 - -
Gso8g0700 290 CDD SDR_a5 57 272 - -
Gso8g0700 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 271 IPR036291 -
Gso8g0700 290 Gene3D - 43 277 - -
Gso8g0700 290 Pfam NAD(P)H-binding 62 259 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0700 Gso-Chr8 6408537 6410710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0700 55 172 Monolignol Biosynthesis Gene Families AT2G33590 37.008 7.02e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0700 - - gmx:100812074 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1104 5 34233170 34235365 Gso8g0700 8 6408537 6410710 GST