Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0696 ATGCAAACTCGGGAATATTTTCTCCCAGATAAGATGGGACTTCCTTTGGCTGATGAGACCATTGATCCTCATATGCATGCTCCACTTGCTTCTACCTTTGATGCATATTTACCTCCAGGTGTGAGGCAGATAACACCCATTGAAAGATTTAAATTGCTACCCTCTGAGGCTTGCCCCAAGAACTTTGTCATCTTTGATCAAACAGATCAACAAAGCAGGATCATGTTCCATCCTGCAATGACCTACAAATTTGACAGTCCTAGCTTACATGCTCATGCTACTGGTTCTCAAGATTTTGAGAAGAACAAAGTCAATCAAATGGAAAGAGAATTGTCATCTGCTTTTGAAGAAGATCCTAATGACATTGATGCATTGTTGAGCATAGGAGCGGATGAACTAGAAGACTTTGACGAGGAAGAAGTCAGCACAGCAAGGACTCGTGAAAAATATGAAAGTTTATCCGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAAGAGGTCATCATCATCATCTTCTGTACAGAAGTCTTCTGGGGCTGGGGGTTACTGCCACAATGAAGGGAAGCACCAGGAGATAAAGAGGATGGTGAGGATGTTGAGAAAGATTGTGCCTGATGGAGGTAATCAAATGGATTCTGTTGCTGTTTTAAATGAAGCTGTTAAATACCTCAAGTCTCTCAAAGTTGAGGTTGAACAATTCAGGGTTGAACCATGA 720 0.4139 MQTREYFLPDKMGLPLADETIDPHMHAPLASTFDAYLPPGVRQITPIERFKLLPSEACPKNFVIFDQTDQQSRIMFHPAMTYKFDSPSLHAHATGSQDFEKNKVNQMERELSSAFEEDPNDIDALLSIGADELEDFDEEEVSTARTREKYESLSDTCSSYCSKSRKKRSSSSSSVQKSSGAGGYCHNEGKHQEIKRMVRMLRKIVPDGGNQMDSVAVLNEAVKYLKSLKVEVEQFRVEP* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0696 239 MobiDBLite consensus disorder prediction 160 188 - -
Gso8g0696 239 Gene3D - 190 237 IPR036638 GO:0046983
Gso8g0696 239 PANTHER TRANSCRIPTION FACTOR BHLH144 1 238 - -
Gso8g0696 239 MobiDBLite consensus disorder prediction 160 181 - -
Gso8g0696 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 236 IPR036638 GO:0046983
Gso8g0696 239 Coils Coil 97 117 - -
Gso8g0696 239 PANTHER TRANSCRIPTION FACTOR BHLH145 1 238 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0696 Gso-Chr8 6385837 6388961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0696 16 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 39.834 1.26e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0696 - - gmx:100811004 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1100 5 34209381 34212509 Gso8g0696 8 6385837 6388961 GST