Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0692 ATGGCGAAAAAGGCAAAAGGGTCTCACTCTGCTTCTTCTGCCTCTGCATCTTCCCGCAAACTAGTGCTGAGGATTAAATCAAACGAGGGAATCAAGAGATCAGTGCGGCAGACTAATTCAAGAAAGAAACCCAAAGCAAAGCAAAAGAAGAACAAACAAATGTTTGATGCTATGAAACCCAAGAAACCTCCGACAGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATACTATGATATAGCAACAAAAAAACGTGAAGAATTTGATAACGCAATGGCTGAATTTAATAAGAAAATGGAAAATGGCGAGTTTGACGAAACTGATGATGAATCAGAGTTTGATGAGTAA 447 0.3893 MAKKAKGSHSASSASASSRKLVLRIKSNEGIKRSVRQTNSRKKPKAKQKKNKQMFDAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDNAMAEFNKKMENGEFDETDDESEFDE* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0692 148 SUPERFAMILY HMG-box 47 136 IPR036910 -
Gso8g0692 148 SMART hmgende2 59 130 IPR009071 -
Gso8g0692 148 CDD HMGB-UBF_HMG-box 60 126 - -
Gso8g0692 148 Gene3D High mobility group box domain 55 144 IPR036910 -
Gso8g0692 148 Pfam HMG (high mobility group) box 60 129 IPR009071 -
Gso8g0692 148 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 60 129 IPR009071 -
Gso8g0692 148 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 2 147 - -
Gso8g0692 148 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 2 147 - -
Gso8g0692 148 MobiDBLite consensus disorder prediction 1 60 - -
Gso8g0692 148 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0692 Gso-Chr8 6354396 6357778 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gso8g0692 HMG_box 5.8e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0692 - - gmx:100809401 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1097 5 34173197 34176676 Gso8g0692 8 6354396 6357778 GST