Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0691 ATGGCCAAGGATATAAAAAGGAAAGTTTTAAGACAGCAATGGCTCACATCTATGTACTGTGAAATTAAGGCTGAATGCCGGAGACAAACTTTACTCAAACATTTTGGAGAATCTTTTGATAGAAGAGACTGCAAGTATGGATCTAGCCCCTGTGATAACTGTCTCAAGACTGTATTCAAACTAGTGCTGAGGATTGAATCAAACGAGGGAATCAAGAGATCAGAGCGGCAGACTAATTCAAGAAAGAAACCCAAAGCAAAGCAAAAGAAGAACAAACAAATGTTTGATGCTATGAAACCCAAGAAATCTCCGTTTACTGGAAGTTCTTTTTCTTTCTTAAGGAAGGATCTTCATAAAGAATTTCAAGAGCAGAATCCAGATATAAAGTCAATGTATGATATTGGCAAGGCGTGTGGAGAGAAGTGGAAAACAATGACCTTTGAGAACGCATCATCTTGTACAAGATTTGCACGAACTCAGAGCGAGAGCAACAGGAGGAATTGTCTACTTTCCGCAACCAGATATGTTCTGAAGGAAATCGATCAAGCACAAATGGAACAATTACACAAGAAAATTGAGGATGACTTAGAGGTCTCAAGATTGGCAAGCATCTGGAAAGAAGTGGATATCAATGACTAA 639 0.3865 MAKDIKRKVLRQQWLTSMYCEIKAECRRQTLLKHFGESFDRRDCKYGSSPCDNCLKTVFKLVLRIESNEGIKRSERQTNSRKKPKAKQKKNKQMFDAMKPKKSPFTGSSFSFLRKDLHKEFQEQNPDIKSMYDIGKACGEKWKTMTFENASSCTRFARTQSESNRRNCLLSATRYVLKEIDQAQMEQLHKKIEDDLEVSRLASIWKEVDIND* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0691 212 Pfam HMG (high mobility group) box 108 146 IPR009071 -
Gso8g0691 212 MobiDBLite consensus disorder prediction 72 103 - -
Gso8g0691 212 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 60 149 - -
Gso8g0691 212 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 60 149 - -
Gso8g0691 212 CDD HMG-box 100 146 - -
Gso8g0691 212 SUPERFAMILY HMG-box 86 147 IPR036910 -
Gso8g0691 212 Pfam RecQ zinc-binding 18 55 IPR032284 -
Gso8g0691 212 Gene3D - 3 195 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0691 Gso-Chr8 6339459 6353185 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gso8g0691 HMG_box 1.1e-05 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0691 - - gsj:114421473 423.705