Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0690 ATGTTGTCCCTAAAGATTAGTTTGACTATAGGCATAGTCCTTTCCATTGTATCCATAGTTTCCCATGCTGAAACAAGCTTGGATGTTGAAATTCAAGCATTGAAAGCTTTCAAGAACTCCATCACTGGTGACCCAAGTGGGGCTCTTGCAGATTGGGTTGACAGTCACCACCACTGCAACTGGTCTGGCATTGCATGTGATCCATCTTCAAGTCATGTCATTTCAATTTCCCTGGTTAGTCTTCAGCTCCAAGGGGAGATTTCACCTTTCCTTGGAAACATTTCAGGCCTTCAGGTTCTTGATTTAACTTCAAACTCATTCACTGGCTACATTCCTGCTCAGCTCAGTTTTTGCACTCATCTTTCTACACTATCTCTTTTTGAAAATTCTCTCTCAGGTCCTATTCCTCCTGAATTAGGAAATCTTAAAAGCCTGCAGTATTTGGATTTAGGTAACAATTTCTTGAATGGAAGCCTCCCTGACAGCATATTCAACTGCACTTCTTTGTTGGGAATTGCTTTTACTTTCAACAACCTTACTGGCAGAATCCCATCAAACATTGGGAATCTAGTTAATGCTACACAGATTTTAGGTTATGGAAATAACTTGGTAGGGTCTATACCTCTTTCCATAGGTCAGTTAGGAGCTTTGCGAGCTCTTGATTTTAGCCAGAACAAGTTATCAGGTGTAATACCTCGAGAGATTGGAAATCTGACAAATTTAGAATACCTTCTATTGTTCCAAAATTCCTTGAGTGGGAAAATCCCTTCCGAGATTGCTAAGTGTAGCAAGCTTTTAAACCTTGAGTTTTATGAAAATCAGTTTATTGGAAGTATTCCTCCTGAGCTAGGAAATTTAGTTCGGTTGGAGACTCTGAGGTTATATCACAATAATTTGAATTCCACCATTCCATCTTCCATTTTCCAGTTGAAATCGTTAACACATTTAGGACTCTCAGAGAATATATTGGAGGGAACAATATCTTCTGAGATTGGATCTCTGAGTTCCTTACAGGTTCTAACCCTGCATTCAAATGCTTTTACTGGGAAGATCCCTTCATCAATAACAAACTTGACAAACTTGACATATCTGTCAATGAGCCAGAATCTCCTTTCAGGTGAACTTCCTCCAAACTTGGGTGTGCTTCATAATTTGAAGTTTCTTGTTTTGAACTCCAACAACTTTCATGGATCCATTCCCTCTAGCATTACCAATATTACTAGTCTTGTAAATGTAAGTTTGTCTTTTAATGCTTTAACTGGGAAAATTCCTGAGGGTTTTTCAAGGTCGCCTAATCTTACTTTCCTGTCTCTTACATCCAACAAAATGACTGGGGAAATCCCAGATGACCTCTATAACTGCTCAAATCTTAGCACTCTAAGTTTGGCAATGAACAACTTCAGTGGATTGATAAAATCAGGTATCCAGAACCTGTCTAAACTCATACGCCTGCAGCTGAATGCAAATTCTTTCATAGGACCAATTCCACCAGAGATTGGAAACTTGAATCAACTCGTCACTTTATCCCTTTCAGAAAATAGGTTTTCAGGTCAAATTCCTCCAGAACTGTCCAAACTTTCTCACCTTCAGGGGCTCTCTCTATATGCAAATGTATTAGAAGGTCCAATACCTGATAAGCTCTCTGAATTAAAAGAACTAACTGAACTTATGCTGCATCAAAACAAGTTGGTTGGTCAAATACCTGATTCTCTCTCAAAGCTTGAGATGCTTTCATTCTTAGACCTTCACGGCAACAAACTTGATGGGTCCATTCCAAGAAGCATGGGGAAGCTTAATCAGCTTTTATCATTGGATCTCTCTCACAACCAGCTCACAGGATCAATTCCCAGAGATGTCATTGCACACTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAACCACTTGGTTGGAAGTGTTCCAACTGAGTTGGGCATGTTGGGAATGATACAAGCTATTGATATTTCAAACAATAATCTTTCAGGTTTCATTCCCAAAACACTTGCTGGATGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAATATTTCAGGTCCTATTCCTGCAGAAGCTTTTAGTCACATGGACTTGCTTGAAAACTTAAACCTCTCAAGTAATCATCTAGAAGGTGAAATCCCTGAAATATTAGCAGAACTTGATCATCTTAGTTCCCTAGATCTTTCTCAGAATGACTTGAAGGGAACTATTCCTGAGCGCTTTTCCAACCTTTCCAACTTGGTGCATCTCAACCTTTCCTTCAATCAACTTGAAGGTCCTGTACCCAATTCCGGAATTTTTGCACACATCAATGCATCTAGTATGGTAGGAAACCAGGATCTTTGTGGAGCTAAGTTCCTATCACAATGCAGAGAAACAAAACATTCACTATCCAAGAAGAGCATATCTATTATTGCTTCACTTGGATCACTTGCTATACTGCTATTACTAGTGTTGGTGATTCTAATTCTCAATAGAGGTATCAAACTCTGCAATTCTAAAGAAAGGGATATTAGTGCGAATCATGGACCAGAATACAGTTCAGCATTGCCACTTAAAAGGTTCAATCCAAAGGAGTTGGAGATTGCCACTGGTTTTTTCAGTGCAGACAGCATCATTGGTTCTAGCAGTTTGAGCACAGTTTACAAAGGTCAAATGGAAGATGGCCAGGTTGTAGCCATAAAAAGATTGAATCTGCAACAATTCTCTGCAAATACTGACAAGATCTTCAAGAGAGAAGCCAACACCTTGAGCCAGATGAGACATAGGAATTTGGTCAAGGTACTTGGATATGCCTGGGAGAGTGGGAAAATGAAGGCTTTGGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACACGGCAAAGGGGTAGATCAGTCTGTGACCTCTAGGTGGACATTATCTGAAAGAGTCCGAGTTTTCATTTCTATTGCTAGTGCATTGGATTATTTGCACTCTGGTTATGATTTTCCCATTGTGCACTGTGATTTAAAGCCTTCTAACATTCTTTTAGACAGAGAGTGGGAAGCTCATGTCAGTGACTTTGGGACAGCACGAATACTTGGTCTTCATGAGCAGGCTGGTAGTACCCTTTCCTCATCAGCAGCTTTGCAAGGCACAGTTGGCTATATGGCACCAGAATTTGCCTACATGAGGAAAGTAACAACTGAAGCGGATGTGTTCAGCTTTGGTATCATAGTAATGGAGTTTCTAACAAAAAGAAGGCCGACAGGACTCTCAGAAGAGGATGGTTTGCCAATCACTTTGCATGAAGTGGTGACAAAAGCCCTTGCAAATGGAATAGAACAACTTGTTGATATCGTGGACCCTTTGTTGACCTGGAATGTTACAAAAAATCATGATGAAGTGTTGGCAGAGCTCTTTAAGCTATCCCTGTGCTGCACCCTCCCTGATCCTGAACATCGACCCAATACAAATGAGGTGTTATCTGCCCTTGTGAAGCTTCAAACAACACTGTCTTGTTAA 3498 0.4008 MLSLKISLTIGIVLSIVSIVSHAETSLDVEIQALKAFKNSITGDPSGALADWVDSHHHCNWSGIACDPSSSHVISISLVSLQLQGEISPFLGNISGLQVLDLTSNSFTGYIPAQLSFCTHLSTLSLFENSLSGPIPPELGNLKSLQYLDLGNNFLNGSLPDSIFNCTSLLGIAFTFNNLTGRIPSNIGNLVNATQILGYGNNLVGSIPLSIGQLGALRALDFSQNKLSGVIPREIGNLTNLEYLLLFQNSLSGKIPSEIAKCSKLLNLEFYENQFIGSIPPELGNLVRLETLRLYHNNLNSTIPSSIFQLKSLTHLGLSENILEGTISSEIGSLSSLQVLTLHSNAFTGKIPSSITNLTNLTYLSMSQNLLSGELPPNLGVLHNLKFLVLNSNNFHGSIPSSITNITSLVNVSLSFNALTGKIPEGFSRSPNLTFLSLTSNKMTGEIPDDLYNCSNLSTLSLAMNNFSGLIKSGIQNLSKLIRLQLNANSFIGPIPPEIGNLNQLVTLSLSENRFSGQIPPELSKLSHLQGLSLYANVLEGPIPDKLSELKELTELMLHQNKLVGQIPDSLSKLEMLSFLDLHGNKLDGSIPRSMGKLNQLLSLDLSHNQLTGSIPRDVIAHFKDMQMYLNLSYNHLVGSVPTELGMLGMIQAIDISNNNLSGFIPKTLAGCRNLFNLDFSGNNISGPIPAEAFSHMDLLENLNLSSNHLEGEIPEILAELDHLSSLDLSQNDLKGTIPERFSNLSNLVHLNLSFNQLEGPVPNSGIFAHINASSMVGNQDLCGAKFLSQCRETKHSLSKKSISIIASLGSLAILLLLVLVILILNRGIKLCNSKERDISANHGPEYSSALPLKRFNPKELEIATGFFSADSIIGSSSLSTVYKGQMEDGQVVAIKRLNLQQFSANTDKIFKREANTLSQMRHRNLVKVLGYAWESGKMKALVLEYMENGNLDSIIHGKGVDQSVTSRWTLSERVRVFISIASALDYLHSGYDFPIVHCDLKPSNILLDREWEAHVSDFGTARILGLHEQAGSTLSSSAALQGTVGYMAPEFAYMRKVTTEADVFSFGIIVMEFLTKRRPTGLSEEDGLPITLHEVVTKALANGIEQLVDIVDPLLTWNVTKNHDEVLAELFKLSLCCTLPDPEHRPNTNEVLSALVKLQTTLSC* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0690 1165 Gene3D Transferase(Phosphotransferase) domain 1 947 1164 - -
Gso8g0690 1165 SMART LRR_typ_2 745 770 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 550 574 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 502 526 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 142 166 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 286 310 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 238 262 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 358 382 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 334 357 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 721 744 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 648 671 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 214 237 IPR003591 -
Gso8g0690 1165 SMART LRR_typ_2 598 622 IPR003591 -
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 519 623 IPR032675 -
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 26 176 IPR032675 -
Gso8g0690 1165 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 177 257 IPR032675 -
Gso8g0690 1165 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Gso8g0690 1165 ProSiteProfiles Protein kinase domain profile. 868 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0690 1165 SUPERFAMILY Protein kinase-like (PK-like) 846 1156 IPR011009 -
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 624 799 IPR032675 -
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 258 425 IPR032675 -
Gso8g0690 1165 SUPERFAMILY L domain-like 30 300 - -
Gso8g0690 1165 SMART LRR_sd22_2 358 373 - -
Gso8g0690 1165 SMART LRR_sd22_2 142 174 - -
Gso8g0690 1165 SMART LRR_sd22_2 214 240 - -
Gso8g0690 1165 SMART LRR_sd22_2 721 747 - -
Gso8g0690 1165 SMART LRR_sd22_2 550 579 - -
Gso8g0690 1165 SMART LRR_sd22_2 598 619 - -
Gso8g0690 1165 SMART LRR_sd22_2 502 534 - -
Gso8g0690 1165 SMART LRR_sd22_2 382 408 - -
Gso8g0690 1165 PRINTS Leucine-rich repeat signature 601 614 - -
Gso8g0690 1165 PRINTS Leucine-rich repeat signature 721 734 - -
Gso8g0690 1165 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Gso8g0690 1165 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 296 369 - -
Gso8g0690 1165 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 116 - -
Gso8g0690 1165 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 163 297 - -
Gso8g0690 1165 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 112 163 - -
Gso8g0690 1165 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 364 1160 - -
Gso8g0690 1165 CDD STKc_IRAK 874 1159 - -
Gso8g0690 1165 Pfam Protein kinase domain 870 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0690 1165 SMART serkin_6 868 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0690 1165 Gene3D Ribonuclease Inhibitor 426 518 IPR032675 -
Gso8g0690 1165 Gene3D Phosphorylase Kinase; domain 1 832 946 - -
Gso8g0690 1165 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 364 1160 - -
Gso8g0690 1165 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 112 163 - -
Gso8g0690 1165 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 296 369 - -
Gso8g0690 1165 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 163 297 - -
Gso8g0690 1165 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 1 116 - -
Gso8g0690 1165 SUPERFAMILY RNI-like 220 617 - -
Gso8g0690 1165 SUPERFAMILY L domain-like 554 783 - -
Gso8g0690 1165 Pfam Leucine rich repeat 652 710 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0690 Gso-Chr8 6332368 6337173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0690 20 1160 Receptor kinase-like Gene Family AT5G46330 54.040 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso8g0690 Pkinase 7.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0690 K13420 - gmx:100817960 2185.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1092 5 34100929 34105398 Gso8g0690 8 6332368 6337173 GST