Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0689 ATGAAACTCTGCAATTCTAAAGAAAGGGATATTAGTGCGAATCATGGACCAGAATACAGTTCAGCATTGCCACTTAAAAGGTTCAATCCAAAGGACTTGGAAAATGCAACTGGTTTTTTCAGCTATGACAGCATCATTGGTGCTAGTAGTTTGAGCACAGTTTACAAGGGTCAAATGGAAGATGACCAGTTTGTTGCCATAAAAAGATTGAATTTGCAACAGTTCTCTGTAAATACTGACAAGATCTTCAAGAGGGAAGCCAAAATCTTGTGCCAGATGAGACATAGGAATTTGGTTAAGGTACTTGGATATGCCTGGGAGAGTGGGAAAATGAAGGCTTTGGTTCTAGAGTACATGGAGAATGGGAATTTGGATGGCATAATACATGACAAAGGGAAAGATGAGTCTGTGATCTCTAGGTGGACATTATCTGAAAGAGTCCGAGTTTTCATTTCTATTGCTAGTGCATTGGATTATCTGCACTCTGGTTATGATTTTCCCATTGTACACTGTGAGTTAAAGCCTTCTAACATCCTTCTAGATAGAGATTGGGAAGCTCATGTCAGTGACTTTGGGACAGCTCGAATACTTGGCCTTCATCTGCAGGATGGTAGTACCCTTTCCTCATCTGCAGCTTTGCAAGGCACATTGGGCTATATGGCACCAGAATTTGCCTACATGAGGAAAGTAACCACTAAAGCAGATGTGTTCAGCTTCGGTGTCATAGTAATGGAGTTTCTAACAAAAAGAAGGCCGACAGGACTCTAA 768 0.4115 MKLCNSKERDISANHGPEYSSALPLKRFNPKDLENATGFFSYDSIIGASSLSTVYKGQMEDDQFVAIKRLNLQQFSVNTDKIFKREAKILCQMRHRNLVKVLGYAWESGKMKALVLEYMENGNLDGIIHDKGKDESVISRWTLSERVRVFISIASALDYLHSGYDFPIVHCELKPSNILLDRDWEAHVSDFGTARILGLHLQDGSTLSSSAALQGTLGYMAPEFAYMRKVTTKADVFSFGVIVMEFLTKRRPTGL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0689 255 ProSiteProfiles Protein kinase domain profile. 40 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0689 255 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 254 - -
Gso8g0689 255 Gene3D Phosphorylase Kinase; domain 1 4 118 - -
Gso8g0689 255 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 2 254 - -
Gso8g0689 255 SUPERFAMILY Protein kinase-like (PK-like) 17 253 IPR011009 -
Gso8g0689 255 Gene3D Transferase(Phosphotransferase) domain 1 119 255 - -
Gso8g0689 255 Pfam Protein kinase domain 43 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0689 Gso-Chr8 6323959 6326755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0689 17 255 Receptor kinase-like Gene Family AT5G46330 63.598 5.98e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso8g0689 Pkinase 3.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0689 K13420 - gsj:114421469 511.531