Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0684 ATGTCTGTTGAACCTAAGGAACTTTACTACCAGGACCTTGTCCTAGACCACAATATCATTAATAATCAGCATCAGGGCACAGAAGCAGGATCTAATACTACTATGTACGAAAAGCACTTTTCCTCTACCTTAATTCCTTCAGTTTCAGCAGCATATGATTCATCACAAGCCTTTGATCCCTCTTACATGAGTTTCACTGACTGTTTGCAAGGAAGCATGGACTACAACTCACTTGCAACTTCTTTTGGCCTTTCTCCTTCCTCATCTGAGGTTTTTTCTTCTGTTGAAGGGAACCAAAAGCCAGCAGAAGGAGGAGGAGATGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGGCAGTGAAACCCTTGCGACCCTTAACTCTTCTATCTCTTCTTCATCTTCTGAAGCCGGGGCTGAGGAAGATTCAGGAAAGAGCAAAAAAGAAAGGCAAGTGAAAACTGAAGAAGGAGGAGAAAACTCTAAGAAAGGGAACAAGGAGAAGAAGAAAGGAGAGAAGAAGCAAAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAAAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAACACAACCATCCGGTCCCCACTTCTCTCAGAGGGAATGCGGCCGCAGGAATGTTCACACCCTCTTCTTTGCTAGCCACACCAACTCATCCACTCGCAGCCGGGTCAAACTTCCCGCAAGATCTCTTCCTTCACATGCATTACCCTCGTCACCACCACCAATATCATCACATTCACAACAACCTCTTCGCCACACAATCCATGACAAATGCTACTACTGCTACTACTACAACCACCACTGCTACCATCGCTCCGTCCTCGTTTTACTCTTCCTATAACAACATTAACAACTCTCTTCTTAACAACCAGTTTCTTCCTCCAGAATACGGCCTCCTTCAAGACATAGTCCCTTCCATGTTACACAACAAGTCCCATCATAACCAGAATTAA 1119 0.454 MSVEPKELYYQDLVLDHNIINNQHQGTEAGSNTTMYEKHFSSTLIPSVSAAYDSSQAFDPSYMSFTDCLQGSMDYNSLATSFGLSPSSSEVFSSVEGNQKPAEGGGDGGGGGGGGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKERQVKTEEGGENSKKGNKEKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSSLLATPTHPLAAGSNFPQDLFLHMHYPRHHHQYHHIHNNLFATQSMTNATTATTTTTTATIAPSSFYSSYNNINNSLLNNQFLPPEYGLLQDIVPSMLHNKSHHNQN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0684 372 SUPERFAMILY WRKY DNA-binding domain 182 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0684 372 MobiDBLite consensus disorder prediction 119 138 - -
Gso8g0684 372 Gene3D WRKY domain 174 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0684 372 MobiDBLite consensus disorder prediction 139 184 - -
Gso8g0684 372 ProSiteProfiles WRKY domain profile. 185 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0684 372 MobiDBLite consensus disorder prediction 86 184 - -
Gso8g0684 372 SMART WRKY_cls 190 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0684 372 PANTHER WRKY TRANSCRIPTION FACTOR 81 37 290 - -
Gso8g0684 372 Pfam WRKY DNA -binding domain 191 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0684 372 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 290 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0684 Gso-Chr8 6274250 6276826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0684 46 291 WRKY Transcription Factor Family AT4G18170 56.048 2.05e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0684 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0684 - - gsj:114422823 595.119