Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0684 | ATGTCTGTTGAACCTAAGGAACTTTACTACCAGGACCTTGTCCTAGACCACAATATCATTAATAATCAGCATCAGGGCACAGAAGCAGGATCTAATACTACTATGTACGAAAAGCACTTTTCCTCTACCTTAATTCCTTCAGTTTCAGCAGCATATGATTCATCACAAGCCTTTGATCCCTCTTACATGAGTTTCACTGACTGTTTGCAAGGAAGCATGGACTACAACTCACTTGCAACTTCTTTTGGCCTTTCTCCTTCCTCATCTGAGGTTTTTTCTTCTGTTGAAGGGAACCAAAAGCCAGCAGAAGGAGGAGGAGATGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGGCAGTGAAACCCTTGCGACCCTTAACTCTTCTATCTCTTCTTCATCTTCTGAAGCCGGGGCTGAGGAAGATTCAGGAAAGAGCAAAAAAGAAAGGCAAGTGAAAACTGAAGAAGGAGGAGAAAACTCTAAGAAAGGGAACAAGGAGAAGAAGAAAGGAGAGAAGAAGCAAAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAAAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAACACAACCATCCGGTCCCCACTTCTCTCAGAGGGAATGCGGCCGCAGGAATGTTCACACCCTCTTCTTTGCTAGCCACACCAACTCATCCACTCGCAGCCGGGTCAAACTTCCCGCAAGATCTCTTCCTTCACATGCATTACCCTCGTCACCACCACCAATATCATCACATTCACAACAACCTCTTCGCCACACAATCCATGACAAATGCTACTACTGCTACTACTACAACCACCACTGCTACCATCGCTCCGTCCTCGTTTTACTCTTCCTATAACAACATTAACAACTCTCTTCTTAACAACCAGTTTCTTCCTCCAGAATACGGCCTCCTTCAAGACATAGTCCCTTCCATGTTACACAACAAGTCCCATCATAACCAGAATTAA | 1119 | 0.454 | MSVEPKELYYQDLVLDHNIINNQHQGTEAGSNTTMYEKHFSSTLIPSVSAAYDSSQAFDPSYMSFTDCLQGSMDYNSLATSFGLSPSSSEVFSSVEGNQKPAEGGGDGGGGGGGGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKERQVKTEEGGENSKKGNKEKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSSLLATPTHPLAAGSNFPQDLFLHMHYPRHHHQYHHIHNNLFATQSMTNATTATTTTTTATIAPSSFYSSYNNINNSLLNNQFLPPEYGLLQDIVPSMLHNKSHHNQN* | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0684 | 372 | SUPERFAMILY | WRKY DNA-binding domain | 182 | 250 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0684 | 372 | MobiDBLite | consensus disorder prediction | 119 | 138 | - | - | |
Gso8g0684 | 372 | Gene3D | WRKY domain | 174 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0684 | 372 | MobiDBLite | consensus disorder prediction | 139 | 184 | - | - | |
Gso8g0684 | 372 | ProSiteProfiles | WRKY domain profile. | 185 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0684 | 372 | MobiDBLite | consensus disorder prediction | 86 | 184 | - | - | |
Gso8g0684 | 372 | SMART | WRKY_cls | 190 | 249 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0684 | 372 | PANTHER | WRKY TRANSCRIPTION FACTOR 81 | 37 | 290 | - | - | |
Gso8g0684 | 372 | Pfam | WRKY DNA -binding domain | 191 | 248 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0684 | 372 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 37 | 290 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0684 | Gso-Chr8 | 6274250 | 6276826 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0684 | 46 | 291 | WRKY Transcription Factor Family | AT4G18170 | 56.048 | 2.05e-73 | 229 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso8g0684 | WRKY | 1.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0684 | - | - | gsj:114422823 | 595.119 |