Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0683 ATGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGAAGCCTCAACCATTTCCACCACTATGCCCCTTACCAGAACACGACGAAATCGTTCTTCCTATGACCCCTTCGGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGAGACCCTTCACCTCTGGCTGATGCCTTAACACTCTCTTACAATTCCCCAAAATGCCCCTCCTCTTCAAACTCACAGGACTATGCATCACCGCCACTATTTGATTCCCAACAACAGCAACCGCTCAACTCTTGGCTCCTTGACCCCAGTTACGAGTCATGGCGGAAAACGAACCTTCACCGATCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAACCCCCACACCGCCGTGCAAAGACCCCAGTTTGCCAGCCAGAGTATTGTCCGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCCACCGAGACTCATCCTGTAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTATGGTGACATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCGGTGAAGGGGAGGAGGGGTGAGAAGGATGGAAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCTTTGGGGGTTGTGGTGATTTGTACTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTCGGTTATGTCGGTTACCACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTTCTCTATCTGGCTGAGGCCAGAGTGGATAAGCGTCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTAGCAGCAGACATTGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGCAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACGCTTGCTGATCTTATGGAGAATCATAATTGA 1293 0.4702 MEKEPLLPYFSPRKKPQPFPPLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSYNSPKCPSSSNSQDYASPPLFDSQQQQPLNSWLLDPSYESWRKTNLHRSKTAPAMAVISDFNPHTAVQRPQFASQSIVRQGVILLALYLALGVVIYWFNRHNFTATETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICTGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQVSEKFDRLDAGNCGKITLADLMENHN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0683 430 PRINTS Two pore domain K+ channel signature 188 216 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso8g0683 430 PRINTS Two pore domain K+ channel signature 308 317 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso8g0683 430 Gene3D - 274 336 - -
Gso8g0683 430 Pfam Ion channel 152 231 IPR013099 -
Gso8g0683 430 Pfam Ion channel 276 345 IPR013099 -
Gso8g0683 430 MobiDBLite consensus disorder prediction 64 92 - -
Gso8g0683 430 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 93 425 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gso8g0683 430 MobiDBLite consensus disorder prediction 1 23 - -
Gso8g0683 430 PANTHER TWO-PORE POTASSIUM CHANNEL 3 93 425 - -
Gso8g0683 430 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Gso8g0683 430 Gene3D - 337 430 - -
Gso8g0683 430 SUPERFAMILY Voltage-gated potassium channels 142 231 - -
Gso8g0683 430 SUPERFAMILY EF-hand 366 426 IPR011992 -
Gso8g0683 430 MobiDBLite consensus disorder prediction 43 92 - -
Gso8g0683 430 SUPERFAMILY Voltage-gated potassium channels 260 366 - -
Gso8g0683 430 Gene3D - 144 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0683 Gso-Chr8 6247909 6251736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0683 4 427 Ion Channels AT4G18160 62.989 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0683 K05389 - gmx:100804249 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1085 5 33981732 33989972 Gso8g0683 8 6247909 6251736 GST