Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0680 ATGAGTTTCACCTTCACCACCATGACCTTGAACTTGGTCCTCTTAATGGCCATGGTGGCCACCAACATCCTCTCCCTCTACCACCTCTCCTCCACCCTCCAATCCCCCAAATCCCCCAAACCACCCCCACCTGTCCCCGACCAACTCCTCCACCAGCTCCACACTATACGCGCCACCATCAACCACCTCACGCGCCTCCAGAACATTAACAACCCAACTAAAAAATCCACCATCCCCTCAGATCTACTCTTATACTCCCACCTCTCCCCAATAGCCTCCTCCTGCCACAACCACCCCGAACTCCTCCACAAGTACATGACTTACACACCTTTCTCTCTCTGCCCCTCCGATTCCGACCTCGCCGAATCCCTAATCCTCCGCGGCTGCCACCCCCTCCCCCGCCGCCGCTGCTTCTCCAAAACACCACAGAAACAAATTCCCCCAAATTCCCTCCCTAAAAACCCCTTCCCTTCCTCCCTCCCTAACAACGCTGTAATTTGGGATCATTACCAATGCAAATCGTTCGATTGCTTGAATAAACAAAACCCTAACCTCGGCTTCCAACCTTCTCGTGATATTTCGAGGTTCAATTCGTATAAGACTGATTTGGATCTCCCGATCCAGCAGCTGTTTCAGATCGCGGCGGCCGCGAAGTCGGTGCTGCGCCTCGGCCTCGACGTCGGCGGCGGCACCGGCTCCTTCGCCGCAGCGATGAGGCTCCGCAACGTGACCGTGGTAACCACGACCATGAACGTGGCGGCGCCGAACAGCGAGGCCGTCGCGCTGCGGGGGCTCGTGCCGCTGCACATGCCACTGCAGCAGCGGCTTCCGCTGTTCGACGGCGTCCTGGATCTAGTGCGGTGCGGGCGCGCCGTGAACCGGTGGATTCCGTTGACGGTGATGGAGTTTCTGCTGCTGGATGTTGATAGGGTGCTGAGGGGAGGAGGGTACCTTTGGGTGGATCATTTTTTCAGCAAAGGGGTGGACCTTGAGAAGGTGTATGCGCCTTTGATCGGGAAATTGGGGTACAAGAAGGTGAAGTGGGCGACGGGGAATAAGACCGATGCCGGTGGGGTAAAAAATGGGGAAGTTTACTTGACTGCGTTGCTGCAGAAGCCTGTGTCCAGATGA 1131 0.5676 MSFTFTTMTLNLVLLMAMVATNILSLYHLSSTLQSPKSPKPPPPVPDQLLHQLHTIRATINHLTRLQNINNPTKKSTIPSDLLLYSHLSPIASSCHNHPELLHKYMTYTPFSLCPSDSDLAESLILRGCHPLPRRRCFSKTPQKQIPPNSLPKNPFPSSLPNNAVIWDHYQCKSFDCLNKQNPNLGFQPSRDISRFNSYKTDLDLPIQQLFQIAAAAKSVLRLGLDVGGGTGSFAAAMRLRNVTVVTTTMNVAAPNSEAVALRGLVPLHMPLQQRLPLFDGVLDLVRCGRAVNRWIPLTVMEFLLLDVDRVLRGGGYLWVDHFFSKGVDLEKVYAPLIGKLGYKKVKWATGNKTDAGGVKNGEVYLTALLQKPVSR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0680 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 225 348 IPR029063 -
Gso8g0680 376 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 207 318 IPR004159 GO:0008168
Gso8g0680 376 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 6 375 - -
Gso8g0680 376 Gene3D Vaccinia Virus protein VP39 194 358 IPR029063 -
Gso8g0680 376 PANTHER EXPRESSED PROTEIN 6 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0680 Gso-Chr8 6227239 6231253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0680 - - gmx:100816366 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1082 5 33954803 33958498 Gso8g0680 8 6227239 6231253 GST
Gso8g0680 8 6227239 6231253 Gso8g1528 8 14888153 14896503 PCT