Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0676 ATGCTTCCATTTCTTTCTCAAAGTTTCAACACTCTTTGTTTGTCCTCAGCTTCTGAACTCAACCAAGACAAAGCCATGCATGAAACAAATATGATGAAGGCCAATTCTAACTTGCATAAAAGAAAGTCTAGCTTGATTAGTGGTGGACATCCTTCTGCATTCAAGAAGAGGATATCAAGAAGGGGAAGCTATGAGGATTCTCTTGAAGTTGAAAGAAAGCAGCTAGAGGATAATTTTACTACAGAAGACAATTATAATGAGAATGAGGATAAGAATGATGTTGGTGACAACACGGATGCAGAAAAAGCAAGAGATGATGATGATGTAGTGGATGACCATCAAGAGGAAGCAGAGTACTTACCAGAGGGTGATGGTCCAACTGCTACAGAGGAGCAACACCACAAAGGTTTGGTCACAAAAGATGCAAATGAAAAGAATAAGCCTTCTACACGACATTTCATCCATGGATATCACTTGATCCAAGGACAGATGAATCATGGAATGGAAGACCATATTTTTGCTCAACACAGGAATCTCGACGGTTATGACTTAGGGTTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCAAAGTCATCTGTTCGAAAATATACTGAGTGAGCCTGAATTCTGGGAAAATCCAGTGCATGCTGTTAAGAAAGCATGTAAAGCCACGGATGATGAGATTTTAGAAAACATAGCTGATTCACGTGGAGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTAGCCAACATTGGTGATTCTCGAGCAATATCGTGCAAAAATGGTCGAGCAAAACCACTTACTGTGGATCATGAACCAGAGAAGGAAAAAGATCTTATTGAGAGTAGAGGAGGTTTTGTGTCTAAGAAGCCAGGGAATGTTCCCAGAGTGGATGGCCAATTAGAAATGACACGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACGGCAGAACCAGATGTGACGATTCGGAAGATTGATGAAGACACTGAATTCATCATTTTGGCAAGTGATGGCCTATGGAAGGTGATGACAAATCAGGAGGCTTGTGACTGTATCAGGGATGAGGATGATGCGCAAAAAGCATCCAAGAAGTTAGTCAAAGAAGCTAAATCTCAGGGAAGCTATGATGATATTTCATGCATAGTTATTATATTCTAG 1203 0.404 MLPFLSQSFNTLCLSSASELNQDKAMHETNMMKANSNLHKRKSSLISGGHPSAFKKRISRRGSYEDSLEVERKQLEDNFTTEDNYNENEDKNDVGDNTDAEKARDDDDVVDDHQEEAEYLPEGDGPTATEEQHHKGLVTKDANEKNKPSTRHFIHGYHLIQGQMNHGMEDHIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLQSHLFENILSEPEFWENPVHAVKKACKATDDEILENIADSRGGSTAVAAILINGVKLLVANIGDSRAISCKNGRAKPLTVDHEPEKEKDLIESRGGFVSKKPGNVPRVDGQLEMTRAFGDGKLKEHITAEPDVTIRKIDEDTEFIILASDGLWKVMTNQEACDCIRDEDDAQKASKKLVKEAKSQGSYDDISCIVIIF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0676 400 Coils Coil 17 37 - -
Gso8g0676 400 MobiDBLite consensus disorder prediction 127 147 - -
Gso8g0676 400 CDD PP2Cc 153 400 IPR001932 -
Gso8g0676 400 SMART PP2C_4 144 398 IPR001932 -
Gso8g0676 400 MobiDBLite consensus disorder prediction 40 147 - -
Gso8g0676 400 SMART PP2C_SIG_2 159 400 IPR001932 -
Gso8g0676 400 Gene3D - 152 400 IPR036457 -
Gso8g0676 400 Pfam Protein phosphatase 2C 165 393 IPR001932 -
Gso8g0676 400 SUPERFAMILY PP2C-like 151 400 IPR036457 -
Gso8g0676 400 PANTHER ALPHABET, ISOFORM E-RELATED 99 400 - -
Gso8g0676 400 ProSiteProfiles PPM-type phosphatase domain profile. 154 400 IPR001932 -
Gso8g0676 400 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 99 400 - -
Gso8g0676 400 MobiDBLite consensus disorder prediction 58 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0676 Gso-Chr8 6192389 6196918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0676 139 400 PP2C-type Phosphatase Gene Family AT3G15260 56.654 4.81e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0676 - - gmx:100814772 766.918