Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0653 ATGTGCAATATCCTTGGCACAATTATGGAGAACTATCAAGGTGATTTAAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCACGGGAACTTCATCATCTGAAGCTGCTAATCCCTTCTCTCGTAATTATCACTTGCAGTTCTCTTCTGATCCCACGATTTTCTCTTCTGTTTTGGAAGGGTTTAATAGCAACTTTGGTGATCCATTTTCAAATATGAGAGATCCCTTTCTACACGAGCTTGATTTGCCTCTCTCTGCCTATTTTAATAGCACAAGTTCATCTGCAGAAATTAAGAGTTCTGGGGCATTGGAAGAAGCAACTTGTTTTGGTGGTGGGGTTGTTGCTGGTAGTAGTAGTAGTAGTAATAGTTGTGTTTTGGCACAGAAGATTCTTGATGAGGATGATATGAGAAGGCCATGTAACAGCATATTGTCAAACATGATTCAGATCTCTCCCAATGATAAGTTACCCATCTCGCCAGTGGTGGATTCTTTGTCAAGGCCATTCAAGCCTTCTGGTGCGGTTTCAGGTCACAACATGATTGATGCAAAGACCTCTTCAGATTATTGCTTGGTGGACAACACAAAAGTGCAGATCTCATCTCCAAGGAATCCAGGTCTTAAGAGAAGAAAGAGCCTGGCAAAGAAGTCGATTTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGGAAACAAGTTGAGAGGAGCAGAACAGACCCTAACATGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACACACAGAAATGCTCTCGCTGGTTCATCTCGATCCCAACCATCAAAAAACAACAACATTGCTGCTTCAAAGAATGAGGAAGAAGAGGAGGAGGAGAGCAATAGTGACAGCAATAAAGTAAATAACAATGTCTTTGTGAGGGAGGAAGAGAAGCAGCTTGAGATGGATGATGTAGAATTCTGTGATATTGGAGTCCCTTATTACAGGCCAATATCTAAGATGAATAACTACCTACAACTTGATCAGGGCTTGTTTGCAGAATTTGGAGAAATAGAAAAGGATGAGTCAGTAAACCTATTGTCTCCACCACAAGGTTTTGATGATCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATTTCTTTGACTGGAGAGGTGATATTTAA 1290 0.4217 MCNILGTIMENYQGDLSDIIRASGASYGSCSTGTSSSEAANPFSRNYHLQFSSDPTIFSSVLEGFNSNFGDPFSNMRDPFLHELDLPLSAYFNSTSSSAEIKSSGALEEATCFGGGVVAGSSSSSNSCVLAQKILDEDDMRRPCNSILSNMIQISPNDKLPISPVVDSLSRPFKPSGAVSGHNMIDAKTSSDYCLVDNTKVQISSPRNPGLKRRKSLAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNIAASKNEEEEEEESNSDSNKVNNNVFVREEEKQLEMDDVEFCDIGVPYYRPISKMNNYLQLDQGLFAEFGEIEKDESVNLLSPPQGFDDQQRESNALDSFHFFDWRGDI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0653 429 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0653 429 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 428 IPR044810 GO:0003700
Gso8g0653 429 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0653 429 MobiDBLite consensus disorder prediction 266 285 - -
Gso8g0653 429 Gene3D WRKY domain 229 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0653 429 SUPERFAMILY WRKY DNA-binding domain 238 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0653 429 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 428 - -
Gso8g0653 429 MobiDBLite consensus disorder prediction 293 345 - -
Gso8g0653 429 Pfam WRKY DNA -binding domain 242 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0653 429 MobiDBLite consensus disorder prediction 293 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0653 Gso-Chr8 6027032 6031148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0653 1 428 WRKY Transcription Factor Family AT1G30650 40.998 2.30e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0653 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0653 - - gmx:102669548 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1053 5 33645730 33650271 Gso8g0653 8 6027032 6031148 GST