Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0653 | ATGTGCAATATCCTTGGCACAATTATGGAGAACTATCAAGGTGATTTAAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCACGGGAACTTCATCATCTGAAGCTGCTAATCCCTTCTCTCGTAATTATCACTTGCAGTTCTCTTCTGATCCCACGATTTTCTCTTCTGTTTTGGAAGGGTTTAATAGCAACTTTGGTGATCCATTTTCAAATATGAGAGATCCCTTTCTACACGAGCTTGATTTGCCTCTCTCTGCCTATTTTAATAGCACAAGTTCATCTGCAGAAATTAAGAGTTCTGGGGCATTGGAAGAAGCAACTTGTTTTGGTGGTGGGGTTGTTGCTGGTAGTAGTAGTAGTAGTAATAGTTGTGTTTTGGCACAGAAGATTCTTGATGAGGATGATATGAGAAGGCCATGTAACAGCATATTGTCAAACATGATTCAGATCTCTCCCAATGATAAGTTACCCATCTCGCCAGTGGTGGATTCTTTGTCAAGGCCATTCAAGCCTTCTGGTGCGGTTTCAGGTCACAACATGATTGATGCAAAGACCTCTTCAGATTATTGCTTGGTGGACAACACAAAAGTGCAGATCTCATCTCCAAGGAATCCAGGTCTTAAGAGAAGAAAGAGCCTGGCAAAGAAGTCGATTTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGGAAACAAGTTGAGAGGAGCAGAACAGACCCTAACATGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACACACAGAAATGCTCTCGCTGGTTCATCTCGATCCCAACCATCAAAAAACAACAACATTGCTGCTTCAAAGAATGAGGAAGAAGAGGAGGAGGAGAGCAATAGTGACAGCAATAAAGTAAATAACAATGTCTTTGTGAGGGAGGAAGAGAAGCAGCTTGAGATGGATGATGTAGAATTCTGTGATATTGGAGTCCCTTATTACAGGCCAATATCTAAGATGAATAACTACCTACAACTTGATCAGGGCTTGTTTGCAGAATTTGGAGAAATAGAAAAGGATGAGTCAGTAAACCTATTGTCTCCACCACAAGGTTTTGATGATCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATTTCTTTGACTGGAGAGGTGATATTTAA | 1290 | 0.4217 | MCNILGTIMENYQGDLSDIIRASGASYGSCSTGTSSSEAANPFSRNYHLQFSSDPTIFSSVLEGFNSNFGDPFSNMRDPFLHELDLPLSAYFNSTSSSAEIKSSGALEEATCFGGGVVAGSSSSSNSCVLAQKILDEDDMRRPCNSILSNMIQISPNDKLPISPVVDSLSRPFKPSGAVSGHNMIDAKTSSDYCLVDNTKVQISSPRNPGLKRRKSLAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNIAASKNEEEEEEESNSDSNKVNNNVFVREEEKQLEMDDVEFCDIGVPYYRPISKMNNYLQLDQGLFAEFGEIEKDESVNLLSPPQGFDDQQRESNALDSFHFFDWRGDI* | 430 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0653 | 429 | SMART | WRKY_cls | 240 | 300 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0653 | 429 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 13 | 428 | IPR044810 | GO:0003700 | |
Gso8g0653 | 429 | ProSiteProfiles | WRKY domain profile. | 235 | 301 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0653 | 429 | MobiDBLite | consensus disorder prediction | 266 | 285 | - | - | |
Gso8g0653 | 429 | Gene3D | WRKY domain | 229 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0653 | 429 | SUPERFAMILY | WRKY DNA-binding domain | 238 | 301 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0653 | 429 | PANTHER | WRKY TRANSCRIPTION FACTOR 14-RELATED | 13 | 428 | - | - | |
Gso8g0653 | 429 | MobiDBLite | consensus disorder prediction | 293 | 345 | - | - | |
Gso8g0653 | 429 | Pfam | WRKY DNA -binding domain | 242 | 299 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0653 | 429 | MobiDBLite | consensus disorder prediction | 293 | 322 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0653 | Gso-Chr8 | 6027032 | 6031148 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0653 | 1 | 428 | WRKY Transcription Factor Family | AT1G30650 | 40.998 | 2.30e-80 | 253 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso8g0653 | WRKY | 1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0653 | - | - | gmx:102669548 | 794.267 |