Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0649 ATGGACTGGAGGCGCTGGACTAAGAATAAGAAGAACCACCACCACCCTCCGCCGCAGCTGCAACCGCGCTTGGAGCGCCTCAACGCCAAAAAAGGCATCAATTACCAATCACCACCTTCTCCTCCTTCCCCTTCTTCTTCTTCTTCTCACTTGGATCGCCAAACCAGCTTCCGCCTCTTCGGCTTCGACGGCGAATTCGACCGCATCTTCCAGACCCTGGGCCTCTCCGGCCCAGAAGACTTCTCCATCCCCACCGCTGACTGGGAAGCCCACAAGGCCCGCTTATCTGGGCCCACCACCATTCCTCCCCCTCACACGCTTCCTCCCACTTCCCAGATTCAAGACGATGACGTTTCGGTTCCCGCTGCGGTTTCTTCTTCCTCCCCTTGGTCTTCCGGGGAGCACTACGTGGGCAGGGGCAGTGTCGGTAGATTGAATTTGAGACACGGCGAAAGGAGCGTGCTTTTCACCGATTCCGATTCCTTCACTACTTCACACGACGATGACAGTGATGTTGGTGGAGAGAGGGAGAGAGCGGGTCTCGCTTCTAATTCTGCAGCCGCTGATGAGTTGGTTATTCCGTTTAACTCATCCAACGAGTGGTTTAGACAGACTTTCGCTTCGTGGCAGAAAGGTGACGTCTTGGGAAATGGGTCCTTCGGAACTGTCTATGAAGGCTTCAATGATGATGGATTCTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGTGGCCAGGGAAAACAGAGCTTTTTTCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCAAACAAGGACAAAAGTAAATTATATATATTCCTTGAGCTTATGTCAAAAGGGTCATTGGCAAGTCTCTATCAAAAGTATCGGTTAAACGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCATAATGTGGTCCACAGGGACATCAAGTGTGCTAATATACTGGTTAATGTAAGGGGGCAAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATATTAAATCAAGCAAAGGCTCTCCATATTGGATGGCCCCAGAGGTTGTTAACTTAAAGAATCAAGGTGGTTATGGGCTAGCAGCTGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACAAGACAGCCTCCCTATTCTGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGCCGGGGTGAACCTCCACCTATTCCTGAATATTTATCTAAGGATGCCCGGGATTTCATCCTTGAATGCTTACAAGTTAACCCAAACGATCGTCCAACTGCAGCTCAGCTATTTTATCATTCTTTTCTAAGGAGAACAGTTCTATCTCCCTGA 1413 0.4728 MDWRRWTKNKKNHHHPPPQLQPRLERLNAKKGINYQSPPSPPSPSSSSSHLDRQTSFRLFGFDGEFDRIFQTLGLSGPEDFSIPTADWEAHKARLSGPTTIPPPHTLPPTSQIQDDDVSVPAAVSSSSPWSSGEHYVGRGSVGRLNLRHGERSVLFTDSDSFTTSHDDDSDVGGERERAGLASNSAAADELVIPFNSSNEWFRQTFASWQKGDVLGNGSFGTVYEGFNDDGFFFAVKEVSLLDEGGQGKQSFFQLQQEISLLSKFEHKNIVRYYGSNKDKSKLYIFLELMSKGSLASLYQKYRLNDSQVSAYTRQILCGLKYLHDHNVVHRDIKCANILVNVRGQVKLADFGLAKATKFNDIKSSKGSPYWMAPEVVNLKNQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGRGEPPPIPEYLSKDARDFILECLQVNPNDRPTAAQLFYHSFLRRTVLSP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0649 470 MobiDBLite consensus disorder prediction 1 52 - -
Gso8g0649 470 PRINTS Tyrosine kinase catalytic domain signature 287 300 IPR001245 GO:0004672|GO:0006468
Gso8g0649 470 PRINTS Tyrosine kinase catalytic domain signature 322 340 IPR001245 GO:0004672|GO:0006468
Gso8g0649 470 PRINTS Tyrosine kinase catalytic domain signature 389 411 IPR001245 GO:0004672|GO:0006468
Gso8g0649 470 PRINTS Tyrosine kinase catalytic domain signature 432 454 IPR001245 GO:0004672|GO:0006468
Gso8g0649 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Gso8g0649 470 MobiDBLite consensus disorder prediction 94 135 - -
Gso8g0649 470 PANTHER BNAA02G34600D PROTEIN 9 467 - -
Gso8g0649 470 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Gso8g0649 470 Gene3D Transferase(Phosphotransferase) domain 1 207 469 - -
Gso8g0649 470 Pfam Protein kinase domain 210 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0649 470 MobiDBLite consensus disorder prediction 110 134 - -
Gso8g0649 470 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 467 - -
Gso8g0649 470 SMART serkin_6 209 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0649 470 MobiDBLite consensus disorder prediction 162 176 - -
Gso8g0649 470 MobiDBLite consensus disorder prediction 158 183 - -
Gso8g0649 470 SUPERFAMILY Protein kinase-like (PK-like) 208 465 IPR011009 -
Gso8g0649 470 ProSiteProfiles Protein kinase domain profile. 209 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0649 Gso-Chr8 5992066 5997504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0649 23 96 MAP Kinase Kinase Kinase AT4G08500 42.353 1.53e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso8g0649 Pkinase 7.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0649 - K13414 gmx:100807806 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1049 5 33594148 33599759 Gso8g0649 8 5992066 5997504 GST
Gso8g0649 8 5992066 5997504 Gso15g0419 15 3825970 3830283 PCT
Gso15g0418 15 3818421 3824667 Gso8g0649 8 5992066 5997504 PCT