Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0648 ATGGGTAGAAGTCGAGAAAAACCTTCAAAGATGGAAATTGATCTCTCTTTGAAGATAGATACAGATGATGAGCATAATGAAGAAGTAGATGAGAGAGTGAAAGAGGATAACGAGGAAGAAATGGCACAGACTCCAGATAATAACAAGGAATTAGAAGTCCATGAAGCCACAGCTGGTGAAATAGAAGACGATGCATCAGTGGTAGAAACATCTTTGCAAGATAACACAAAAGCAAAAGAGTTAAGTGTCTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTTCTGAGGAAAGTGGTGGAACAAACAATGAAAGACTATTATAATCTGCAAATGAAATTCTCTGCCATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTTCAAGACATTGCGACCACCAGCGGTGAAGGACCATCGAGAATTAATGAGATCTTTAACAAACAAATTCGTCAAAGTGCTCCATCTCCTCCACACACTACTGATCATGATGATAGTTTAAGCGAGAGTGAATTGGGTTTATCACTAAGGTTGCAACCAAGCACAAGTCATCATAAAGAAAGTAATGTGGGAAATAACAATAAGGAAGACAAAAATGATCAACAATTGGCAAGTTTTGCATCAGTGCAGAACAAACTACAGCGGACACATGAGTTGCCTGGTATTACTACCCATGCTGCTTTCCCTCCTAACAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAAGCTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGGCAGAAAATTGCAAAAGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCCCCAGGCTGCCCTGTTAGGAAACAGGTGCAAAGATGTATAGATGACATGTCCATACTAATCACAACCTATGAAGGGACACATAACCATCCACTCCCTGTGGGTGCAACTGCTATGGCTTCCACAGCTTCTGCAGCAGCTTCCTTCATGTTGCTAGACTCAAGCAACCCCATTTCAGATGGCACCTCAAGCTTCACTCAAGCACCATTTCCTTACAACACCTTCAACCCTCTAAACCCAGCTTCAAATTTCAGGAGCATAAGCCCTAGTGATCCATCCAAAGGGATTGTTCTTGATCTCACTAGCAACCTCACTGAACCACCCATACGTTTTTCCACGGGTAGCTCCTCTAATATTAATACTACTACAGATCCTCGTTTTTCCTGGATGCAAAACAAATACCAAGGTGGTGGTGGTGCAAGTGCAATGAACAACAATAATTTTCACAAGCCTAGGGCATTGGATATTCATGATAGAATTTGGAAAGGAGAAGAAAACAATAATAATAATAAGCCAATAGATCATGACAATGTATCCGCAATTGCCTCAGATCCTAAATTTAGAGTTGCTGTTGCTGCGGCCATAACATCTCTCATGAATAAAGAGAGCCACACTACTCATCCTATAGGAACTTCCTTTGGCCCTAGGAGTAGCCAAAATGGTAGCTAG 1512 0.4134 MGRSREKPSKMEIDLSLKIDTDDEHNEEVDERVKEDNEEEMAQTPDNNKELEVHEATAGEIEDDASVVETSLQDNTKAKELSVLQMEMESMKEENKVLRKVVEQTMKDYYNLQMKFSAIQENNKRKDHEISLSLQDIATTSGEGPSRINEIFNKQIRQSAPSPPHTTDHDDSLSESELGLSLRLQPSTSHHKESNVGNNNKEDKNDQQLASFASVQNKLQRTHELPGITTHAAFPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGTSSFTQAPFPYNTFNPLNPASNFRSISPSDPSKGIVLDLTSNLTEPPIRFSTGSSSNINTTTDPRFSWMQNKYQGGGGASAMNNNNFHKPRALDIHDRIWKGEENNNNNKPIDHDNVSAIASDPKFRVAVAAAITSLMNKESHTTHPIGTSFGPRSSQNGS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0648 503 MobiDBLite consensus disorder prediction 1 51 - -
Gso8g0648 503 MobiDBLite consensus disorder prediction 483 503 - -
Gso8g0648 503 Pfam WRKY DNA -binding domain 254 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0648 503 MobiDBLite consensus disorder prediction 178 194 - -
Gso8g0648 503 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0648 503 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso8g0648 503 Coils Coil 81 108 - -
Gso8g0648 503 SUPERFAMILY WRKY DNA-binding domain 246 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0648 503 Gene3D WRKY domain 238 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso8g0648 503 MobiDBLite consensus disorder prediction 157 204 - -
Gso8g0648 503 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 12 489 IPR044810 GO:0003700
Gso8g0648 503 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 12 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0648 Gso-Chr8 5984377 5987493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0648 48 376 WRKY Transcription Factor Family AT1G68150 46.991 2.09e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso8g0648 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0648 - - gmx:100820209 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1048 5 33577486 33580623 Gso8g0648 8 5984377 5987493 GST