Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso8g0648 | ATGGGTAGAAGTCGAGAAAAACCTTCAAAGATGGAAATTGATCTCTCTTTGAAGATAGATACAGATGATGAGCATAATGAAGAAGTAGATGAGAGAGTGAAAGAGGATAACGAGGAAGAAATGGCACAGACTCCAGATAATAACAAGGAATTAGAAGTCCATGAAGCCACAGCTGGTGAAATAGAAGACGATGCATCAGTGGTAGAAACATCTTTGCAAGATAACACAAAAGCAAAAGAGTTAAGTGTCTTACAAATGGAGATGGAGAGCATGAAAGAGGAAAACAAAGTTCTGAGGAAAGTGGTGGAACAAACAATGAAAGACTATTATAATCTGCAAATGAAATTCTCTGCCATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTTCAAGACATTGCGACCACCAGCGGTGAAGGACCATCGAGAATTAATGAGATCTTTAACAAACAAATTCGTCAAAGTGCTCCATCTCCTCCACACACTACTGATCATGATGATAGTTTAAGCGAGAGTGAATTGGGTTTATCACTAAGGTTGCAACCAAGCACAAGTCATCATAAAGAAAGTAATGTGGGAAATAACAATAAGGAAGACAAAAATGATCAACAATTGGCAAGTTTTGCATCAGTGCAGAACAAACTACAGCGGACACATGAGTTGCCTGGTATTACTACCCATGCTGCTTTCCCTCCTAACAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAAGCTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGGCAGAAAATTGCAAAAGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCCCCAGGCTGCCCTGTTAGGAAACAGGTGCAAAGATGTATAGATGACATGTCCATACTAATCACAACCTATGAAGGGACACATAACCATCCACTCCCTGTGGGTGCAACTGCTATGGCTTCCACAGCTTCTGCAGCAGCTTCCTTCATGTTGCTAGACTCAAGCAACCCCATTTCAGATGGCACCTCAAGCTTCACTCAAGCACCATTTCCTTACAACACCTTCAACCCTCTAAACCCAGCTTCAAATTTCAGGAGCATAAGCCCTAGTGATCCATCCAAAGGGATTGTTCTTGATCTCACTAGCAACCTCACTGAACCACCCATACGTTTTTCCACGGGTAGCTCCTCTAATATTAATACTACTACAGATCCTCGTTTTTCCTGGATGCAAAACAAATACCAAGGTGGTGGTGGTGCAAGTGCAATGAACAACAATAATTTTCACAAGCCTAGGGCATTGGATATTCATGATAGAATTTGGAAAGGAGAAGAAAACAATAATAATAATAAGCCAATAGATCATGACAATGTATCCGCAATTGCCTCAGATCCTAAATTTAGAGTTGCTGTTGCTGCGGCCATAACATCTCTCATGAATAAAGAGAGCCACACTACTCATCCTATAGGAACTTCCTTTGGCCCTAGGAGTAGCCAAAATGGTAGCTAG | 1512 | 0.4134 | MGRSREKPSKMEIDLSLKIDTDDEHNEEVDERVKEDNEEEMAQTPDNNKELEVHEATAGEIEDDASVVETSLQDNTKAKELSVLQMEMESMKEENKVLRKVVEQTMKDYYNLQMKFSAIQENNKRKDHEISLSLQDIATTSGEGPSRINEIFNKQIRQSAPSPPHTTDHDDSLSESELGLSLRLQPSTSHHKESNVGNNNKEDKNDQQLASFASVQNKLQRTHELPGITTHAAFPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGTSSFTQAPFPYNTFNPLNPASNFRSISPSDPSKGIVLDLTSNLTEPPIRFSTGSSSNINTTTDPRFSWMQNKYQGGGGASAMNNNNFHKPRALDIHDRIWKGEENNNNNKPIDHDNVSAIASDPKFRVAVAAAITSLMNKESHTTHPIGTSFGPRSSQNGS* | 504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso8g0648 | 503 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Gso8g0648 | 503 | MobiDBLite | consensus disorder prediction | 483 | 503 | - | - | |
Gso8g0648 | 503 | Pfam | WRKY DNA -binding domain | 254 | 312 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0648 | 503 | MobiDBLite | consensus disorder prediction | 178 | 194 | - | - | |
Gso8g0648 | 503 | SMART | WRKY_cls | 253 | 313 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0648 | 503 | ProSiteProfiles | WRKY domain profile. | 248 | 314 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0648 | 503 | Coils | Coil | 81 | 108 | - | - | |
Gso8g0648 | 503 | SUPERFAMILY | WRKY DNA-binding domain | 246 | 314 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0648 | 503 | Gene3D | WRKY domain | 238 | 315 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso8g0648 | 503 | MobiDBLite | consensus disorder prediction | 157 | 204 | - | - | |
Gso8g0648 | 503 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 12 | 489 | IPR044810 | GO:0003700 | |
Gso8g0648 | 503 | PANTHER | WRKY TRANSCRIPTION FACTOR 9-RELATED | 12 | 489 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso8g0648 | Gso-Chr8 | 5984377 | 5987493 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso8g0648 | 48 | 376 | WRKY Transcription Factor Family | AT1G68150 | 46.991 | 2.09e-82 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso8g0648 | WRKY | 1.7e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso8g0648 | - | - | gmx:100820209 | 858.596 |