Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0637 ATGAAGAAGGTAAGTAATTTGTTGCATACGTTGAAACCAGACATCTTAATGGTGTTTGTGCAGATTGCATTTGCTGCTGTGAATGTGATGTACAAGCTGGCCATAAATGATGGAATGAGCATGAGGGTAGCTTCTGCATATCGCCTTGCTTTTGCTTCGGCTTTCACTGTCCCTGTGGCTCTCGTCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGGGTGCTTTTATTGGCATTTCTGTGTGGATTGTTTGGGGGAAGTTTATTTAGTAACCTTTACCTCGAAGCCATGGCTTTGACGTCAGCAACGTTTATGTTGGCCATGGTCAACCTTATCCCTGGCATTACCTTCATTTTTGCCATATCCTTCGGATTCGAGAAGTTAAATTTGCAAGCAGCAGAAGGAAGGGCAAAGGTCATAGGCACCATAATTGGAATTAGTGGAGCAATGCTGATGACCTTTTTCAAAGGCGTAGAAATTAATATTTGGTCGTCTAATAAAATCAACCTTCTGCATCCACATCTGAACCAAAATGGGCATGTGGCATCTCACCACACTGAGTTTCGAAATAAACTGTTGGGTATTCCATGTGCCATAGTAAGCTGCTGCTTTTATTCTTTATGGTACATCACTCAGGCTAAAATGAATGCAGAATATCCAAGCCCTCACTCAAGCGCAGCTTTAATGAGCATAATGGGAGCGATACAGGCCAATATTTTTACTCTTTGTGTCGAAAGGGATTGGAGCCAATGGAAGCTGGGTTTCAATATCAGGCTTCTAACGGTGGCTTATTCGGGAATGGTGGCCTCTGGAGTAGTGGTCGTGATCATTGCCTGGTGCATAAAGAAGAGAGGCCCTCTATTTGTTTCTGTTTTCAATCCACTACAGCTTTTGTTGGTAGATATCGCTGCTTATTTAATGTTGGAAGAGAAATTGTATTTAGGAAGTGTGCTTGGAGCAGTGATAATTGTGTGCGGTCTATACACGGTGCTTTGGGGTACAGCCCAAGAATTGAAAAAGAAGTCTCAGTTAGTGCCATTAGGAAACACCAGAGGAGAGTCTGAAAATGATCGGGTGGTAAGCCCAGCCATTAATATGGAGAATTTATACAAAGTTGAAGCCACAGGTAATGTGAAGCCTGTACTGTTAATGATTGCGGTCCAGACACTGTATGCAGTGGTGAATATCATGTTAAAGATTGTGGCAGATGATGGAATGAGCTTAAGTGTTCTTGTTGCCTACCGGTTCTTCTTTGCTTCTGCTTTCATCGTTCCGCTTGCTCTCATCTTTGAAAGGAAAAGCCTGCAATATGTTACTGGGAAAGTTCTATTCCAAGGTCTTCTTTGTGGGTTATTTGGGGGATCCTTACTACAAGGTTTCTATGTTAAATCCTTGGCCTTGACAACTGCAGTATATGTCACAGCCATGTTGAACCTCATCCCCGCTGTCACCTACATCTTGTCTGTTACTCTAAGACTTGAGAAGTCAAATCTTGGAACAGCAGGTGGGATGACCAAGTTGCTGGGGACTTTAACAGGAATCGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAGGCTATGCCTCTGGTCAACAAACATTGCCTTGTTGCACCGTGAGCCATCATCACACGATGCCCCCATAGGTTCTCTCTTGTTGGGCTGCATACTAGCTTTTGCAGCCGCTCTGAGTTACTCTGTGTGGTTGATAATCCAGACAAAGATGAGCGAAAAGTTTCCGTGGCACTATTCAATTGCAGCTTTAACCTCTGCAACGGCCTCAATCCTATCCGTTATATTTGCTCTTTCTACGGAGAGAGATTGGAGCCAGTGGAAACTTGGTTGGGACTTTAGGCTTCTAACAGCAGCTTCTGCGGGTATCTTGGCCTCTGGAGTGTGTTACCCCCTTTTAGCATGGTGTGTGCGTAGGAAGGGACCTCTGTTTACATCTGCTTTTTGTCCTCTAATGTTGGTGATAGTGACCCTTTCCGAGACATTGGTACTAGATGAGTGTCTCAGCGTTGGAAGTTTAACAGGATCAGTGTTAATTGTGGGGGGATTGTACATGTTGCTGTGGGGTAAAAGCAAGGAAAAACGGATGGAACATAGTGATATAGTGTCCTCAAAAGGCACTCTTCAATGTGAAGCAATTCACAATACCGACCCATCATCTTAG 2181 0.4379 MKKVSNLLHTLKPDILMVFVQIAFAAVNVMYKLAINDGMSMRVASAYRLAFASAFTVPVALVFDRKKRPKITWRVLLLAFLCGLFGGSLFSNLYLEAMALTSATFMLAMVNLIPGITFIFAISFGFEKLNLQAAEGRAKVIGTIIGISGAMLMTFFKGVEINIWSSNKINLLHPHLNQNGHVASHHTEFRNKLLGIPCAIVSCCFYSLWYITQAKMNAEYPSPHSSAALMSIMGAIQANIFTLCVERDWSQWKLGFNIRLLTVAYSGMVASGVVVVIIAWCIKKRGPLFVSVFNPLQLLLVDIAAYLMLEEKLYLGSVLGAVIIVCGLYTVLWGTAQELKKKSQLVPLGNTRGESENDRVVSPAINMENLYKVEATGNVKPVLLMIAVQTLYAVVNIMLKIVADDGMSLSVLVAYRFFFASAFIVPLALIFERKSLQYVTGKVLFQGLLCGLFGGSLLQGFYVKSLALTTAVYVTAMLNLIPAVTYILSVTLRLEKSNLGTAGGMTKLLGTLTGIGGAMILTFYKGRRLCLWSTNIALLHREPSSHDAPIGSLLLGCILAFAAALSYSVWLIIQTKMSEKFPWHYSIAALTSATASILSVIFALSTERDWSQWKLGWDFRLLTAASAGILASGVCYPLLAWCVRRKGPLFTSAFCPLMLVIVTLSETLVLDECLSVGSLTGSVLIVGGLYMLLWGKSKEKRMEHSDIVSSKGTLQCEAIHNTDPSS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0637 726 PANTHER WAT1-RELATED PROTEIN 12 342 - -
Gso8g0637 726 PANTHER WAT1-RELATED PROTEIN 378 722 - -
Gso8g0637 726 SUPERFAMILY Multidrug resistance efflux transporter EmrE 415 526 - -
Gso8g0637 726 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
Gso8g0637 726 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Gso8g0637 726 SUPERFAMILY Multidrug resistance efflux transporter EmrE 598 699 - -
Gso8g0637 726 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Gso8g0637 726 Pfam EamA-like transporter family 380 504 IPR000620 GO:0016020|GO:0016021
Gso8g0637 726 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Gso8g0637 726 Pfam EamA-like transporter family 555 693 IPR000620 GO:0016020|GO:0016021
Gso8g0637 726 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016021|GO:0022857
Gso8g0637 726 PANTHER WAT1-RELATED PROTEIN 378 722 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0637 Gso-Chr8 5870477 5879859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0637 379 701 Nodulin-like Gene Family AT1G25270 39.634 4.66e-76 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0637 - - gsj:114424758 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1037 5 33403373 33407551 Gso8g0637 8 5870477 5879859 GST
Gso8g0637 8 5870477 5879859 Gso15g0428 15 3918470 3924173 PCT
Gso8g1515 8 14746224 14751908 Gso8g0637 8 5870477 5879859 PCT