Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0626 ATGAAGGAGTTATCTCAGACCCAGAGTGTTGTTGTCCATGGGATTGCTGGTGCTGGTTCAGTGGCTTTAGCCACTGCCTTCACTTATCCTCTCGACAGCATCAAAGTCCTCATTCAGGTTGGTTCCAGCACCGGTAAAGAATTGGACCCTGCCCAGGCTTTGACGAGACTACTCTCTGTGTCCGGCAATGCAGGTTTGTTTAATGGTTTTGGCTGGTTGTTGGCTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTACGAAATCCTGACTGCCTTTTATAAAGATGGTCGGGAAAATAATTATTTGTTTGCTTCTGAGGCTCTTTTGGCTGGCGTGGTAGCTGGTGCCGTTGAGGCAGTCATAAGCTCTCCATTCGAACTCATCAAGCTTCGTATGCAAGTTACTGCTGCTTCATATGTTCCAAGCTCCAACTTTGCTTTGGAAAAGGGGGCTCGTTCACCTTTAATTGCAAGATTACTTCATGGCCGTTATCCAGACAAGAGGGCATTGGACCTATATGTTGGTCTCATCTCCATCCTAAAAACCAAAAATACAAACGTGACCAGTGCCTTGCTAGAGTATCCATGGACAATGACAGGATCTGGGAGGCCACCATCAGTTTCCAATGTCAGGAGACCATCTGACATTATATCTTTGGAAGGATGGAGGACATTTTGGAGAGGACTCCGTCCTGGAATTGTCCGAGATTCTGTGTTTAGCGGCATATTTTTTTCGACCTGGCAATTTCTGCACCAAGCAATGCTAGATTGGAAGGCTGTAGGGATGGATCCTCCACCCAGGTTAAATGAAGAAGTCGGTCCATTGTCTCCTTTGACTGTTAGTCTTACTGCTGGATTCTCAGCTTCAGTTGCTGCTGCTGCTTCACATAGTTTTGATACTACAAGAAGTAGATCACAATGTACTGTGCTGCCAAAGTACATCTCCATGGAGAGAAAGATTCTGAAGTGGAAACGACCAGGAACCAAGTTTGAAAGAATTACTGGCATCCATCCTTCTGACAGAGGTGTCTTGTTCCGTGGTATTGGTTGGCGAATGGCTCGCTCTGGGCTGGCATCATTCATTATTGTAGGAAGTTATTTATTTGTTGCTGATCAGCTTGGTTCTAGTTTGACTTAA 1143 0.4558 MKELSQTQSVVVHGIAGAGSVALATAFTYPLDSIKVLIQVGSSTGKELDPAQALTRLLSVSGNAGLFNGFGWLLAGRIFGLGARFGVYEILTAFYKDGRENNYLFASEALLAGVVAGAVEAVISSPFELIKLRMQVTAASYVPSSNFALEKGARSPLIARLLHGRYPDKRALDLYVGLISILKTKNTNVTSALLEYPWTMTGSGRPPSVSNVRRPSDIISLEGWRTFWRGLRPGIVRDSVFSGIFFSTWQFLHQAMLDWKAVGMDPPPRLNEEVGPLSPLTVSLTAGFSASVAAAASHSFDTTRSRSQCTVLPKYISMERKILKWKRPGTKFERITGIHPSDRGVLFRGIGWRMARSGLASFIIVGSYLFVADQLGSSLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0626 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Gso8g0626 380 PANTHER CARRIER PROTEIN 4 375 - -
Gso8g0626 380 Pfam Mitochondrial carrier protein 108 177 IPR018108 -
Gso8g0626 380 Pfam Mitochondrial carrier protein 7 96 IPR018108 -
Gso8g0626 380 Gene3D Mitochondrial carrier domain 10 378 IPR023395 -
Gso8g0626 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 375 - -
Gso8g0626 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Gso8g0626 380 SUPERFAMILY Mitochondrial carrier 8 368 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0626 Gso-Chr8 5802079 5805841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0626 29 258 Antiporters AT1G79900 23.792 6.10e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0626 - - gmx:100789418 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1027 5 33246987 33250861 Gso8g0626 8 5802079 5805841 GST