Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0624 ATGGCAATGCATGCATTTGGCATCCTTTTGGGTGTTCTTTACTCTCTCTTGAGCTTTGTATCCTCAGATATCAATTTTGTAAAATATGGGTTTAGGCAAGCAGGCTTGAAAATGGATGGAGCTTCTTATGTGAGGCCGAATGGCATACTTACCTTGATAAATGATTCCCCCAAAATCCTTGGCCATGCATTCTATCCATCTCCTTTGCCATTCAAATCTAGCAAAAACAAATCCATTGTTGCAACCTTTAGCACTACCTTTGTGTTTTCCATTGTTCCCAAGTACCCAGAACTTGGTGCACAAGGCTTTGCATTCGTCCTAATATCCACCAACAAACCAAAAGGGTGCCTCATGAATCAATATTTAGGCCTCCCAAATGTGACAAGTAGTCTAGAATTCTCAACCCGGTTCCTAGCCATAGAGTTTGACGGGATACAGAACCTTGATCTTCATGACATGAATGATAATCATGTGGGGATAGACATATCCAGCCTCGTCTCTAACATATCTAAGCCAGTGGCATACTACTTGTCAGATCACAGCAAGAACATTTCTTTCAGTCTGAAGAGTGGAAAACCCATTCAAGCATGGGTTGATTACAATGAAGGAGAGATGTTGATGAATGTTACAGTTTCTCCTTTTGGCATGCCAAAGCCGTATTTTCCTTTGATATCATTTCCCATAGACCTATCCTTGGTGTTGAATGACTACATGTATGCAGGTTTTTCTGCTTCCAATGGTTTGCTGGTAGCTGAGCATAATATACATGGTTGGGGCTTTAAAATCGGAGAAGCAGCACAAGAGCTAGATAAATCAGCTGTTCCACTTATTGGGTCAAGTACTAGTACTTCTAGTAAGGTGGTGCACAAAAAAGACTTTGCAGTAGGTATCACTTTAACAAGTGCAACTCTTTTTATCTTGACAGTTATAGGAGCTTTTCATGTCCTGCGCAGATTAAGAAATGGGGACGAGATATTAGAAGATTGGGAACTTGAATTTGCCTCCCATAAATTTAAATATTCTGAGCTCCATTCAGCTACAGGAAAGTTTGGGGATAGCAACCTTATTGGGTATGGAGGATTTGGTAAAGTCTACAGAGGAGTAATCGCAAGCACAGGACTAGAAGTAGCTGTAAAGCGAGTTGCTCCTGATTCAAGGCAGGGAATCAGAGAATTTGTTTCAGAAATAACAAGCATGGCACAACTAAAGCATAGAAATTTGGTGCAGTTACATGGGTGGTGCAGGAAGAAGGATGAACTCCTCATTGTTTACAACTATGTACCAAACGGGAGCCTAGACAAGCTTCTGTTTGAAAATGAACATCAAAAGAAGAAACTACTAACTTGGGATCAAAGATACATGATCATTACTGGTGTTGCTCAAGGGCTGCTGTATCTCCATGAAGAATGTGAACTGCAGGTTGTTCACAGAGATGTAAAGCCAAGCAATGTCCTTATAGATGAAGATCTCCAACCAAAGCTTGGCGATTTTGGTCTTGCAAGGACTTACGAGCATGGAATTAATCCACAGACAACGAATGTTGTGGGAACACTAGGGTACATGGCCCCTGAGCTCACAAAGACTGGGAAAGCAAGAACAAGCACAGATGTATATGGGTACGGCATACTCATTTTGGGGGTAGCATGTGGAAGGAAGCCAATAGAGCCACAGAAAAATCCTGAGGAACTGATATTGGTAGACTGGGTTAGAGAACTACATCACCAAGGGAAAATCAGCAGGGCTATTGACCCCAGTTTAGATGAGTATGACAAAGATGAAGCTCGGCTTGTGCTTAGTCTTGGGTTGTTTTGTGCTCATCCCAATCCTGATTACAGGCCTAGTATGAGACGGATTGTCCAGTTCCTTCTGGGAGAAACCAGCCTTCCTCCGCTTCCTCCTGACATTCACTGTGAAGATCCAACAGCAATAAGAAAATGCCCAAACAACTTTGCAGATGATTCAGGCTCTTCAAGTTCTATGGTGTCTTCATCAAAATATTGTAGTCTTACATGCTTTGATGAGGTGGTCTCAGCTACTGAAGCCACTGGGTTGTCTTCATAG 2061 0.4207 MAMHAFGILLGVLYSLLSFVSSDINFVKYGFRQAGLKMDGASYVRPNGILTLINDSPKILGHAFYPSPLPFKSSKNKSIVATFSTTFVFSIVPKYPELGAQGFAFVLISTNKPKGCLMNQYLGLPNVTSSLEFSTRFLAIEFDGIQNLDLHDMNDNHVGIDISSLVSNISKPVAYYLSDHSKNISFSLKSGKPIQAWVDYNEGEMLMNVTVSPFGMPKPYFPLISFPIDLSLVLNDYMYAGFSASNGLLVAEHNIHGWGFKIGEAAQELDKSAVPLIGSSTSTSSKVVHKKDFAVGITLTSATLFILTVIGAFHVLRRLRNGDEILEDWELEFASHKFKYSELHSATGKFGDSNLIGYGGFGKVYRGVIASTGLEVAVKRVAPDSRQGIREFVSEITSMAQLKHRNLVQLHGWCRKKDELLIVYNYVPNGSLDKLLFENEHQKKKLLTWDQRYMIITGVAQGLLYLHEECELQVVHRDVKPSNVLIDEDLQPKLGDFGLARTYEHGINPQTTNVVGTLGYMAPELTKTGKARTSTDVYGYGILILGVACGRKPIEPQKNPEELILVDWVRELHHQGKISRAIDPSLDEYDKDEARLVLSLGLFCAHPNPDYRPSMRRIVQFLLGETSLPPLPPDIHCEDPTAIRKCPNNFADDSGSSSSMVSSSKYCSLTCFDEVVSATEATGLSS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0624 686 Gene3D - 21 270 - -
Gso8g0624 686 ProSiteProfiles Protein kinase domain profile. 350 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0624 686 PANTHER - 59 662 - -
Gso8g0624 686 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Gso8g0624 686 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.2-LIKE 59 662 - -
Gso8g0624 686 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Gso8g0624 686 Gene3D Transferase(Phosphotransferase) domain 1 427 627 - -
Gso8g0624 686 SMART serkin_6 350 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0624 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 275 IPR013320 -
Gso8g0624 686 SUPERFAMILY Protein kinase-like (PK-like) 333 640 IPR011009 -
Gso8g0624 686 CDD lectin_legume_LecRK_Arcelin_ConA 17 262 IPR001220 GO:0030246
Gso8g0624 686 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Gso8g0624 686 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0624 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0624 Gso-Chr8 5783223 5785519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0624 23 668 Receptor kinase-like Gene Family AT3G55550 44.257 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g0624 Pkinase 8.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0624 - - gmx:100801966 1314.67