Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0618 ATGACCAACATGGAGCGAATGATTTCATCTTTCATGTCTTTGTTTTTTATTCTTTGGATATTCGTGGTGCTTGACTTAGTTCTCAAGGTTTATGGCCACGCAGAAGGTGATGCCCTGATTGTATTGAAGAACAGTATGATTGATCCTAACAATGCTCTTCATAATTGGGATGCTACCCTTGTCAGTCCTTGCACATGGTTTCATGTTACTTGTAGTGAAAATAGCGTAATTCGTGTTGAGCTTGGAAATGCAAACCTTTCGGGTAAACTTGTTCCAGAGCTTGGTCAGCTCCCAAATTTGCAATACTTGGAACTTTATAGTAATAATATAACTGGGGAAATCCCAGTCGAGCTTGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACATGAACAAAATTACTGGTCCCATTCCAGACGAATTGGCCAACCTTAACCAACTACAGTCCCTGCGTCTCAACGATAACAGTTTGTTGGGAAACATTCCTGTGGGTTTGACCACTATTAATTCACTTCAAGTGCTTGATTTATCAAACAACAACTTAACAGGAGACGTCCCAGTCAATGGTTCCTTTTCAATTTTTACTCCCATCAGTTTTAACAATAATCCTTTCTTGAATAAAACCATTCCAGTTACACCAGCTGCTACACCGCAACAAAATCCTTCAGGTAATGGTATCAAAGCCATTGGAGTCATTGCTGGAGGAGTTGCTGTGGGTGCTGCACTGTTGTTTGCATCCCCAGTAATTGCACTTGTTTATTGGAATAGAAGGAAGCCACTGGATGATTACTTTGATGTCGCAGCTGAGGAGGATCCTGAAGTTAGCCTTGGTCAGCTTAAAAAGTTTTCACTGCCTGAACTGCGAATTGCAACAGATAACTTTAGTAACAAAAACATTCTTGGTAAAGGTGGATTTGGCAAGGTTTATAAAGGACGTTTAACCAATGGTGATGATGTAGCAGTAAAAAGACTTAACCCTGAAAGCATTCGGGGAGACGATAAGCAATTTCAAATAGAAGTGGACATGATCAGCATGGCTGTACATCGAAATTTACTTCGCCTGATTGGTTTCTGTATGACATCTTCTGAACGCTTGCTTGTGTATCCTTTAATGGCTAATGGAAGTGTAGAATCACGTTTACGAGAGCCTTCGGAATCACAGCCACCACTTGATTGGCCAAAACGGAAGAATATTGCTCTAGGAGCTGCTAGGGGGCTTGCTTATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTCAAAGCTGCTAATATATTGTTGGATGAGGAGTTTGAAGCTGTTGTAGGAGATTTTGGTTTAGCAAGGATTATGGATTACAAAAATACTCATGTTACTACCGCTATATGTGGTACGCAGGGCCATATAGCACCAGAGTATATGACAACTGGAAGGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTATGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTTGATTTAGCACGATTGGCCAGGGATGAGGATGCCATGTTGCTTGAATGGGTGAAAGTACTTGTGAAAGACAAGGAGTTGGAGACACTGTTGGATCCAAATTTGCTTGGAAATCGTTATATAGAGGAAGTAGAGGAGTTAATCCAAGTGGCCTTAATATGCACACAAAAATCTCCTTATGAGAGACCAAAGATGTCTGAGGTGGTGAGAATGCTGGAGGGTGAAGGTTTGGAAGAAAAGTGGGATGAATGGTTGAATATGACAGAGGATATACAAAATTTCACCTTCAACCTCTGCACTCCTACTCCTAATGACTCAAATCCAAATATTCAACCAGATGTTCTGTCAGGTCCTAGATGA 1851 0.4073 MTNMERMISSFMSLFFILWIFVVLDLVLKVYGHAEGDALIVLKNSMIDPNNALHNWDATLVSPCTWFHVTCSENSVIRVELGNANLSGKLVPELGQLPNLQYLELYSNNITGEIPVELGNLTNLVSLDLYMNKITGPIPDELANLNQLQSLRLNDNSLLGNIPVGLTTINSLQVLDLSNNNLTGDVPVNGSFSIFTPISFNNNPFLNKTIPVTPAATPQQNPSGNGIKAIGVIAGGVAVGAALLFASPVIALVYWNRRKPLDDYFDVAAEEDPEVSLGQLKKFSLPELRIATDNFSNKNILGKGGFGKVYKGRLTNGDDVAVKRLNPESIRGDDKQFQIEVDMISMAVHRNLLRLIGFCMTSSERLLVYPLMANGSVESRLREPSESQPPLDWPKRKNIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARIMDYKNTHVTTAICGTQGHIAPEYMTTGRSSEKTDVFGYGMMLLELITGQRAFDLARLARDEDAMLLEWVKVLVKDKELETLLDPNLLGNRYIEEVEELIQVALICTQKSPYERPKMSEVVRMLEGEGLEEKWDEWLNMTEDIQNFTFNLCTPTPNDSNPNIQPDVLSGPR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0618 616 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0618 616 MobiDBLite consensus disorder prediction 596 610 - -
Gso8g0618 616 ProSiteProfiles Protein kinase domain profile. 295 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0618 616 Pfam Protein kinase domain 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0618 616 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Gso8g0618 616 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Gso8g0618 616 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Gso8g0618 616 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 616 - -
Gso8g0618 616 Gene3D Phosphorylase Kinase; domain 1 264 370 - -
Gso8g0618 616 Gene3D Ribonuclease Inhibitor 32 213 IPR032675 -
Gso8g0618 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Gso8g0618 616 PANTHER BNAA08G11770D PROTEIN 14 616 IPR031048 GO:0004675|GO:0005102|GO:0006468
Gso8g0618 616 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Gso8g0618 616 MobiDBLite consensus disorder prediction 596 616 - -
Gso8g0618 616 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Gso8g0618 616 SUPERFAMILY L domain-like 35 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0618 Gso-Chr8 5722434 5730101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0618 4 616 Receptor kinase-like Gene Family AT4G33430 63.772 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso8g0618 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0618 K13416 - gmx:100801433 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1018 5 33154667 33162586 Gso8g0618 8 5722434 5730101 GST