Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0615 ATGATTAAAAAAATCAGAGCAATGAATGTTTTATATTTAAGCTCAAGTTCAAGCCTAAGCATGTCCAAGCCGTTTCAATTCTCAAGTAAACATCATCAAAGAGCTTCTAGTGTGAAGTTTGGTGGTGTTTCATGCAGAGCCGCAACGTTAACCCAAGAAAACTTGTACAAAATATTGTCTGTGTGTCCAGGAAGTGCAACAATGGATGAGATCAAGAGGGCTTATAGGTCAATGGCTCTTCAGTACCACCCTGATGTGTGCCATGATCCTTCCATGAAAGAGGAATCAACGAGGATGTTTGTTCAGCTAAACACAGCTTACAAGACCTTGTCCAATCCAAGGCTTCGAGAAGAGTATGACAGTGAATTGGGTTTGGGAAGCACAGAGATGAGTACTGTTAGTAGTGATCATCATGAGAGATGGGGAAGTGTGAGTGTTAGTAGTGAACATGAGAGATGGGAAAGTAGGTTTCAGGAGCAAATGATTGAGTTGAAGACAAGGTCTCGTAGACGTATGGGACAAAAGGGTCAGGGTGGATCATCGGGTAGTAGCAGAATGAGGACACAAAACATGAGAGACAGGAATTGA 588 0.4218 MIKKIRAMNVLYLSSSSSLSMSKPFQFSSKHHQRASSVKFGGVSCRAATLTQENLYKILSVCPGSATMDEIKRAYRSMALQYHPDVCHDPSMKEESTRMFVQLNTAYKTLSNPRLREEYDSELGLGSTEMSTVSSDHHERWGSVSVSSEHERWESRFQEQMIELKTRSRRRMGQKGQGGSSGSSRMRTQNMRDRN* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0615 195 Pfam DnaJ domain 54 120 IPR001623 -
Gso8g0615 195 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 12 194 - -
Gso8g0615 195 MobiDBLite consensus disorder prediction 155 195 - -
Gso8g0615 195 SMART dnaj_3 53 115 IPR001623 -
Gso8g0615 195 Gene3D DnaJ domain 43 144 IPR036869 -
Gso8g0615 195 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 12 194 - -
Gso8g0615 195 PRINTS DnaJ domain signature 57 75 IPR001623 -
Gso8g0615 195 PRINTS DnaJ domain signature 75 90 IPR001623 -
Gso8g0615 195 PRINTS DnaJ domain signature 95 115 IPR001623 -
Gso8g0615 195 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Gso8g0615 195 CDD DnaJ 54 112 IPR001623 -
Gso8g0615 195 MobiDBLite consensus disorder prediction 155 170 - -
Gso8g0615 195 MobiDBLite consensus disorder prediction 173 188 - -
Gso8g0615 195 SUPERFAMILY Chaperone J-domain 31 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0615 Gso-Chr8 5706111 5706998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0615 56 121 C2H2 Transcription Factor Family AT1G74250 39.706 7.98e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0615 - - gmx:100784637 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1012 5 33097420 33098311 Gso8g0615 8 5706111 5706998 GST