Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0600 ATGGCAAACCCTAAAACGAAAAGTCACCATTCGCTAGGCGGCGAGGACGATCTCGACTCGACCGAATCGCGGTGGGTCTTCCAGGAGGACGAGGAGGATCCCTCCGAGATCGAGGATTTCGACGCCGCCGATTTGCGCCACCAGGCCATGTTTGATTCCGACGACGAGGACAATGCTGAACAGAGACTCGTCCGCACCGGTCCCCGTATCGATTCCTTCGACGTCGAAGCCCTCGAGGTTCCCGGCGCTCACAGAAACGACTACGAGGATGTTAGTGTGGGAAAAGGAATTGTCTTAGCTTTTCAAACTCTCGGTGTTGTGTTTGGCGATGTTGGAACAAGTCCTTTGTATACCTTCAGTGTTATGTTTAGGAAGGCTCCTATTAATGGAAATGAAGATATTCTCGGAGCCTTGTCGCTTGTTTTGTACACTTTAATCCTGATTCCGTTAGTGAAGTACGTCCTTGTTGTTCTGTGGGCCAATGATGACGGGGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCCCGAATATCAGGCTTTAGGCTAAAGGTGCCATCTGCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGACTTCAGTGACTCTGAAGAAGATTCTACTTTTATTTGTTCTTGCTGGTATTTCCATGGTGATGGCTAACGGGGTTGTTACACCAGCAATGTCAGTACTATCATCTCTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTTGCGGGCATTGGTATATACAACCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCATATATATTATTTCTTTGCAAGGAATCCAACCAAGGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCTGAGGCTATGTTTGCAGATCTTTGCTATTTCTCTGTACGATCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTAATGCCTTTTATTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTCGTTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCAGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAATTCATACCTCTCGGAAATTCATGGGCCAGATCTATATTCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGCTTGTCTGTTCTATATCCAGCATTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATACACATCATTGTAGTGCTGAGTTTTGCGGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTTGCTGTAATAATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTGATGCAAGAATTAGGCTGCAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTCTATAATGAGTTGGTAAAAGGAATTCCAGGCATTTTTGGGCATTTTCTAACCACACTTCCAGCAATACACTCTATGATCATATTTGTGAGTATTAAGTATGTTCCAGTTCCCATGGTGCCTCAAAGTGAAAGGTTCCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGTATTGCCAGGTATGGTTACAAAGATGTTCGCAAAGAAAATCACCAAACTTTTGAGCAGCTGCTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAAGAGAGGTCGCTTGAGAGTGAAGGGGATGATGATACTGACTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCACTTGGTGTTCCTCTTCTGGCTGATTTTAATGATACAACCATACCCATACCCAATTTTGAAGCAAGCACATCGGAGGAGACAAACCTTGAATCTCCTAAGCCCGCAGTGGTTGATGCTGAGCAGAGTCTTGAAAGAGAGCTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCACGGAGATATAAGAGCAAGAAAAGACTCATGGTTTATCAAGAAGCTAATTATAAACTATTTTTATGCCTTTCTGAGAAAGAATTGCCGAAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTGA 2544 0.4292 MANPKTKSHHSLGGEDDLDSTESRWVFQEDEEDPSEIEDFDAADLRHQAMFDSDDEDNAEQRLVRTGPRIDSFDVEALEVPGAHRNDYEDVSVGKGIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSAELERSLKIKERLETSVTLKKILLLFVLAGISMVMANGVVTPAMSVLSSLNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNPTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLVANIAALIASRAMTTATFSCIKQSAALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVLVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLSFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVIMFFIMFVWNYGSKLKYETEVKQKLSMDLMQELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESEGDDDTDSEDEYSGSRVLIAPNGSVYSLGVPLLADFNDTTIPIPNFEASTSEETNLESPKPAVVDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYAFLRKNCRRGITNLSVPHSHLMQVGMTYMV* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0600 847 Pfam K+ potassium transporter 100 673 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso8g0600 847 TIGRFAM kup: potassium uptake protein 99 847 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso8g0600 847 MobiDBLite consensus disorder prediction 9 30 - -
Gso8g0600 847 PANTHER POTASSIUM TRANSPORTER 2 846 - -
Gso8g0600 847 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso8g0600 847 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0600 Gso-Chr8 5595047 5600848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0600 2 847 Inorganic Solute Cotransporters AT5G09400 77.257 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0600 - - gmx:100778388 1608.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0998 5 32941404 32947078 Gso8g0600 8 5595047 5600848 GST
Gso8g0600 8 5595047 5600848 Gso15g0458 15 4192382 4197005 PCT
Gso8g0600 8 5595047 5600848 Gso8g1485 8 14451212 14457129 PCT
Gso15g0458 15 4192382 4197005 Gso8g0600 8 5595047 5600848 PCT
Gso8g1485 8 14451212 14457129 Gso8g0600 8 5595047 5600848 PCT