Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0599 ATGGATTCTGCGTTCTCCATCAACACCACCGCGCAAGTGGCGCTCTTCAGAGCGCTCCACGGTCATCTCCACCGAGCTCCTCAACGCGCCTTGCTCCGCCGCAACCTAAAATGCCTCGTTACTTCCTATAACAGCAGCAGCAACTGCTGCCGCATTCCGTGCTCTTTCGGCTCCGTGCCGTCGCCGTCCTCGCTTCGATCCTTCCGCGGACTGCTCCCGCGAACGCCGCGCTGCATTTCGAGCTCCGCGGCTTCCTTTGCTTCTCCTGCCGGCGGTGGAAATGGCGGCGCTGGAACCGGCGACGGTGACGGAGGTGGCGGTTCTGGCGGTGAGTCTGGAGATGCTAATCTCAAACTGGTAGGAGACGCGTCTCAGGAGCTTTCCGCACTTTCGCCTGATGTTATCATTCTCGATGTTTCGGGAATGGTATGTGGGGGATGTGCGGCGACTGTAAAAAGGATACTGGAAAATCAACCACAAGTGTCATCTGCTAGTGTAAATTTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAAATGCACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCTGAGCATTTAACTAGTTGTGGCTATAATTCTAGCCTTCGAGACTCAACAAGAGACAACTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGACATAGACAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTATGCGCTGTCTGCCTTGTTGGCCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGGATCCATGTATTTCATTCCATTGGGTTTCATCTTTCGTTGTCTTTGTTTACGTTGCTTGGTCCTGGCCGCCAACTTATCCTTGATGGCTTAAAAAGTCTTCTTAAAAGGACGCCAAACATGAACACCTTAGTTGGTCTCGGGGCTTTATCATCATTTACAGTCAGTTCATTTGCTGCCTTGCTGCCAAAATTGGGTTGGAAGGCCTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTCGAACAGAGAGCTAAGATTAAAGCAGCCAGTGATATGACAGGACTTCTTAGTTTATTGCCACCAAAAGCTCGCCTTCTTTTGAACAATGGGGAAACAGAGGTTGGCTCGGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCAAATTATTGTATTACCTGGAGATCGTATTCCAGCTGATGGAGTTGTGAGATCTGGTAGAAGCACTGTAGACGAATCAAGTTTTACTGGTGAACCACTGCCTGTAACAAAAGTACCTGGGAGTGAGGTAGCAGCTGGGAGTATAAATCTTAATGGAACTCTTACAATGGAAGTGCAGAGACCAGGTAGTGAGACTGCTATGGCAAACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTGCAGCGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAACCTCTGCTGCCACATTCACATTCTGGAGTCTGTATGGCACACACATTTTACCTCCTGCTTTATATCAAGGACGTGCAGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACATCTTTGGGAGCTAAGAGAGGATTACTTCTTCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAGACACCGTTGTGTTTGACAAAACAGGGACCCTCACGGTTGGTAGACCTGTTGTGACAAACATTGTCATTCCTATTTGCATAAAAAATGCAATTTCAAGCCAAACTGAAGAAAATGCTTTGTCTGATGTTGAAGTTCTAAGGTTAGCAGCTGCAGTAGAAACAAATTCAGTACATCCAGTTGGTAAAGCGATTGTGGATGCTGCTCAGGCTGCTAATTGTCATAATGCTAAGCAAAATTTACAGGTAAAAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCTGTGGCAACAATTTATGACAAAAAGGTTTCTGTTGGGACATTAGAATGGATTACCAGGCATGGAGTTATTAACAGTATACATCAAGAAGTGGAGAAGAGTAATAATCAATCCTTTGTCTATGTTGGAGTTGATGATACTTTAGCTGGCCTAATTTATTTTGAAGATGAGATAAGGGAAGACGCAAGAGACGTTGTTGATAGATTGTCAAAGCAAAATATAGGTGTATACATGCTATCAGGAGACAAGAGGAATGCTGCTGAGCATGTTGCGTCCCTTGTTGGAATTCCCAAAGAGAAGGTGCTATCTGAAGTAAAACCAGATGAGAAAAAGAAGTTCATAAATGAACTACAGAAAGATAACAACATTGTAGCAATGGTTGGTGATGGAATTAACGATGCAGCTGCTCTGGCTTCTTCACATGTTGGTATTGCATTAGGTGGAGGTGTCGGGGCTGCTAGTGAGGTGTCTTCTATTGTATTAATGCGCAACCAGCTCTCACAGATAGTTGATGCCTTGGAGCTTAGCAGACTGACCATGAATACTATAAAACAAAATCTTTGGTGGGCTTTCATATACAACATTGTAGGAATTCCAATTGCAGCTGGAGTGTTATTTCCCATAAATGGGACTGTGCTAACTCCATCAATTGCAGGGGCACTCATGGGGTTGAGCTCCATTGGCGTAATGACTAACTCGTTACTTTTGAGATTCAAATTTTCGTCAAAGCAGAAGCAAATACATAGCATATCGCCAAAGACCAAAATCCATGTGGCCCAAAATCAGAAAACAAACCACCCTTATTAG 2826 0.4508 MDSAFSINTTAQVALFRALHGHLHRAPQRALLRRNLKCLVTSYNSSSNCCRIPCSFGSVPSPSSLRSFRGLLPRTPRCISSSAASFASPAGGGNGGAGTGDGDGGGGSGGESGDANLKLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENQPQVSSASVNLTTETAIVWPVSEAKNAPNWQKQLGEALAEHLTSCGYNSSLRDSTRDNFLQIFERKMEERHRQLRESGRELAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSIGFHLSLSLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSLLPPKARLLLNNGETEVGSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRSGRSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVQRPGSETAMANIVRLVEEAQSREAPVQRLADKVAGHFTYGVMATSAATFTFWSLYGTHILPPALYQGRAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVDTVVFDKTGTLTVGRPVVTNIVIPICIKNAISSQTEENALSDVEVLRLAAAVETNSVHPVGKAIVDAAQAANCHNAKQNLQVKDGTFLEEPGSGAVATIYDKKVSVGTLEWITRHGVINSIHQEVEKSNNQSFVYVGVDDTLAGLIYFEDEIREDARDVVDRLSKQNIGVYMLSGDKRNAAEHVASLVGIPKEKVLSEVKPDEKKKFINELQKDNNIVAMVGDGINDAAALASSHVGIALGGGVGAASEVSSIVLMRNQLSQIVDALELSRLTMNTIKQNLWWAFIYNIVGIPIAAGVLFPINGTVLTPSIAGALMGLSSIGVMTNSLLLRFKFSSKQKQIHSISPKTKIHVAQNQKTNHPY* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0599 941 CDD HMA 137 204 IPR006121 GO:0046872
Gso8g0599 941 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 671 879 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g0599 941 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 385 604 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso8g0599 941 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 303 909 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gso8g0599 941 Gene3D - 353 476 - -
Gso8g0599 941 PRINTS Copper-transporting ATPase signature 288 307 - -
Gso8g0599 941 PRINTS Copper-transporting ATPase signature 336 355 - -
Gso8g0599 941 PRINTS Copper-transporting ATPase signature 777 794 - -
Gso8g0599 941 PRINTS Copper-transporting ATPase signature 834 848 - -
Gso8g0599 941 CDD P-type_ATPase_Cu-like 236 911 - -
Gso8g0599 941 PANTHER ATP7, ISOFORM B 110 911 - -
Gso8g0599 941 SUPERFAMILY Calcium ATPase, transduction domain A 384 472 IPR008250 -
Gso8g0599 941 Gene3D - 134 211 - -
Gso8g0599 941 SFLD Haloacid Dehalogenase 566 850 - -
Gso8g0599 941 Pfam Heavy-metal-associated domain 137 204 IPR006121 GO:0046872
Gso8g0599 941 SUPERFAMILY HMA, heavy metal-associated domain 135 206 IPR036163 GO:0046872
Gso8g0599 941 Gene3D - 594 731 IPR023299 GO:0000166
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 583 597 - -
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 723 734 - -
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 745 755 - -
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 800 819 - -
Gso8g0599 941 PRINTS P-type cation-transporting ATPase superfamily signature 823 835 - -
Gso8g0599 941 SUPERFAMILY HAD-like 581 906 IPR036412 -
Gso8g0599 941 SUPERFAMILY Calcium ATPase, transmembrane domain M 334 886 IPR023298 -
Gso8g0599 941 MobiDBLite consensus disorder prediction 83 117 - -
Gso8g0599 941 Pfam E1-E2 ATPase 367 563 - -
Gso8g0599 941 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Gso8g0599 941 Gene3D - 574 850 IPR023214 -
Gso8g0599 941 SFLD p-type atpase 566 850 IPR044492 -
Gso8g0599 941 Pfam haloacid dehalogenase-like hydrolase 579 812 - -
Gso8g0599 941 ProSiteProfiles Heavy-metal-associated domain profile. 134 208 IPR006121 GO:0046872
Gso8g0599 941 ProSitePatterns E1-E2 ATPases phosphorylation site. 585 591 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0599 Gso-Chr8 5575008 5593985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0599 285 910 Primary Pumps ATPases AT1G63440 39.342 4.04e-125 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0599 K17686 - gmx:100777857 1731.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0997 5 32902361 32940688 Gso8g0599 8 5575008 5593985 GST