Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0596 ATGTCGGAGCGTTCGTCTTTCGGATTGGGACCTCGATTAGGTGGTTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCACATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACTGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATATTGGTGGAAAAACATATTCTGATGAGGTTACATCAGATTCCCAGAAGAGCAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACGAGCACTTTGACATCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACACTCCTATCGTGAATCACAAAATTTGGGGAATGATCGTCCGATGGATAAGATTCATGCTCGTTCAAATAGTTCCTATCTTATGCATCCGTTTTCAGATAATCATGGGCAGTTACCAGTTTCTGGAGCAGAATATATCCCACATGTTCAGGGGAATAAGTCTAGAGCTAGTGATACTACTTACATTGAGGGTCAGAGAGCACATGGCATTGCATCCTGGGACAATGCCATGGAACAGTCTGCAGGAAAGCATGCTGATCCTTCTCTTGTATCATCTACATCCATTCCATCAAGTGCAATGGGAAACATACTTGACAAAAACCATACTGTTCCAGGCAACCTTTTAGGGCATAAAATTGCCCTCACTGAAGTGGAAAGGGGCGCTCAGCCTGTCCAATCAAACTGGCAGATTCCTTTTGAAGACAATACTGGAGAATTGCCTAATTGGGGCTTTACCCAATCATTGGGTTTGGAATTTGGATCTGATTATGGTACTAGTTTACTGGGGGATGTAACTAATAATGCAGGCCCAGAAATTGATCCTGAGCTGTTCACTTTTAATGGTGAGTTAAAAGAGCAGTATACACATGGGCAATCTCAACCTGCACTGAAATCCAATTCTGCGTATGAAGTTCCTGGTGAAGCAAGTATCAATTATGCCTTGACCATGAGGCGTGGATTATTGGATGGAGAGGAGAGCCTCAAGAAGGTTGATAGTTTCTCTAGGTGGATGACCAAAGAACTTGCAGGTGTGGATGATCTGCATATGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAATGTGGGGATGTGATAGATGATACATCATTGCACCTGTCCCTGTCTCAAGACCAGCTGTTTAGCATAAACGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTAAAGAGTCAACCTGTGGTGGCAAAATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCCGCTGAGGTTTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACATGTTCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAGGGCTTCGATAGAAATATAAATTTTCCAGATTTTTTTAACAATTCAAGTGAAATGGAGCTTCATTTGCGACTGGTGGGGTTACTTTCGTTAAACTCAATGCACACTTTAAATCAAGTGTTTGAGGGTGATATGGATAAAAGAAACTTAATATTCAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCAAGTAAGGAAGAGACAACTGCAGAGATGGATATATCACAACAGAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAGGAGAAGTTGTACTCATGGCTTCTTCACAAAGTTACTGAAACTGGTAAAGGGCCTCTTGTATTAGATGAAGAGGGGCAAGGCGTGTTACACTTAATTGCTGCTCTTGGTTATGATTGGGCTATAAATCCTATCATAACTGCTGGAGTCAATATCAACTTCCGTGACGTGAATGGATGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGATGCAGCCGCTGGTGCATTGACAGATCCATGTCCCGAATTTCCTTTGGGTAGAACACCTGCAGATCTTGCTTCTAGCAAAGGCCACAAAGGAATTTCTGGTTTTCTTGCTGAGTCATTATTAACTAGCCACCTCGAATCGCTCACAATGGATGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAATGAAAGTAGTGCAGACAGTTTCAGAGCGAACTGCGACACCTGTGCTTAATGGTGATATACCTGATGATATCTGCCTTAAGGATTCTCTTAATGCTGTCCGTAATGCTACACAAGCTGCTGATCGTATATATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAGCTCTGTATGAAGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCTCTCCTAGCTTCTAAGGCGTGCAGATCTGGTCAAGGAGAGGGTTTAGCCAATGCTGCTGCAATACAAATACAGAAAAAGTTTCGTGGTTGGACGAAGAGAAAAGAATTCTTGATTATTCGCCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTCAGGAAGCAGTATAAACCAATCATTTGGTCTGTGGGAATCCTGGAAAAGGTTATATTACGCTGGAGACGCAAGGGCAGTGGTTTACGTGGATTTCGACCAGCTTCCCAGAACAAGGTCCCCGAACAACCAAGCGAATCTCCGAAACAGGATGACTATGATTACCTCAAGGAAGGAAGGAAACAAAGTGAAGTGAAGTTCAAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATATCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGGTAATTTGAATTTGATAAATTCGGAAGAGACAGTCGACGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCTTTCGATTGA 3120 0.4208 MSERSSFGLGPRLGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLELDMMHIVFVHYLDVKVNKTNIGGKTYSDEVTSDSQKSSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSYRESQNLGNDRPMDKIHARSNSSYLMHPFSDNHGQLPVSGAEYIPHVQGNKSRASDTTYIEGQRAHGIASWDNAMEQSAGKHADPSLVSSTSIPSSAMGNILDKNHTVPGNLLGHKIALTEVERGAQPVQSNWQIPFEDNTGELPNWGFTQSLGLEFGSDYGTSLLGDVTNNAGPEIDPELFTFNGELKEQYTHGQSQPALKSNSAYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKELAGVDDLHMQSSPGISWSTDECGDVIDDTSLHLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVAKCNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFDRNINFPDFFNNSSEMELHLRLVGLLSLNSMHTLNQVFEGDMDKRNLIFKLISLKEEEEYSSKEETTAEMDISQQKLKEHMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIAALGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMDAAAGALTDPCPEFPLGRTPADLASSKGHKGISGFLAESLLTSHLESLTMDENKDGRKETSGMKVVQTVSERTATPVLNGDIPDDICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQLALYEDDEFGLSDQQALSLLASKACRSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRPASQNKVPEQPSESPKQDDYDYLKEGRKQSEVKFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLIDIDMLLDDENFLPIAFD* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0596 1039 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 14 1039 - -
Gso8g0596 1039 MobiDBLite consensus disorder prediction 931 955 - -
Gso8g0596 1039 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Gso8g0596 1039 Pfam IPT/TIG domain 455 540 IPR002909 -
Gso8g0596 1039 Pfam CG-1 domain 14 94 IPR005559 GO:0003677
Gso8g0596 1039 Gene3D - 863 909 - -
Gso8g0596 1039 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1039 - -
Gso8g0596 1039 SMART iq_5 862 884 IPR000048 GO:0005515
Gso8g0596 1039 SMART iq_5 885 907 IPR000048 GO:0005515
Gso8g0596 1039 ProSiteProfiles IQ motif profile. 886 910 IPR000048 GO:0005515
Gso8g0596 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 913 IPR027417 -
Gso8g0596 1039 Gene3D - 612 758 IPR036770 -
Gso8g0596 1039 Gene3D Immunoglobulins 448 543 IPR013783 -
Gso8g0596 1039 SUPERFAMILY E set domains 455 541 IPR014756 -
Gso8g0596 1039 SUPERFAMILY Ankyrin repeat 645 749 IPR036770 -
Gso8g0596 1039 MobiDBLite consensus disorder prediction 106 147 - -
Gso8g0596 1039 SMART CG_1_2 1 96 IPR005559 GO:0003677
Gso8g0596 1039 ProSiteProfiles CG-1 DNA-binding domain profile. 1 101 IPR005559 GO:0003677
Gso8g0596 1039 Pfam IQ calmodulin-binding motif 865 883 IPR000048 GO:0005515
Gso8g0596 1039 Pfam IQ calmodulin-binding motif 888 907 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0596 Gso-Chr8 5547970 5559441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0596 15 1020 CAMTA Transcription Factor Family AT5G64220 52.297 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gso8g0596 TIG 1.2e-05 CL0159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0596 K21596 - gmx:100797717 2027.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0996 5 32865626 32876062 Gso8g0596 8 5547970 5559441 GST
Gso8g0596 8 5547970 5559441 Gso15g0460 15 4204197 4215391 PCT
Gso8g0596 8 5547970 5559441 Gso8g1483 8 14428683 14440115 PCT
Gso15g0460 15 4204197 4215391 Gso8g0596 8 5547970 5559441 PCT
Gso8g1483 8 14428683 14440115 Gso8g0596 8 5547970 5559441 PCT