Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0594 ATGGATAGTCTTTGTTGCTTCAGCTCTTTCAGTCAGGTGGTTGGAGGGCGTTCTTCATGTAACTCTGGCAAAGGCAAGAGCAGTCAGTCCTCAGTCAAGTATGGCTATAGCCTAGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCACGTAGCAAAATTTGTCCAGTTCGAAGGGCGAGAGCTTGGGCTTTTTGCTATATATGATGGACACCTGGGTGACAGTGTACCAGCCTATTTACAAAAGCATCTGTTTTCTAACATCTTGAAGGACGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCATATGAGACAACAGATCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTAACTGCAATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCTGTTGTTTCAAGGGGAGGGGTGGCTGGACAGATGTCAACTGATCATGAACCCAATACTGAGCGGGGCAGCATTGAGACCAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTAGCAGTTTCTCGAGCTTTCGGAGACAAAAACCTCAAAACGCACTTGCGATCTGATCCTGACATTCAGTATACTGACATTACCCCAGATGTTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAAGCTGTTGATGTTGCAAGAAGGATAAAGGATCCACAAAAGGCAGCGAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 849 0.4499 MDSLCCFSSFSQVVGGRSSCNSGKGKSSQSSVKYGYSLVKGKANHPMEDYHVAKFVQFEGRELGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFWNDPFMSISNAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGVAGQMSTDHEPNTERGSIETRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYTDITPDVELLILASDGLWKVMANQEAVDVARRIKDPQKAAKQLATEALNRDSKDDISCIVVRFKG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0594 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Gso8g0594 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Gso8g0594 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Gso8g0594 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Gso8g0594 282 SMART PP2C_4 29 278 IPR001932 -
Gso8g0594 282 CDD PP2Cc 32 280 IPR001932 -
Gso8g0594 282 Gene3D - 17 282 IPR036457 -
Gso8g0594 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0594 Gso-Chr8 5531424 5539630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0594 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.732 1.13e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0594 K17506 - gmx:100776795 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0994 5 32842650 32850872 Gso8g0594 8 5531424 5539630 GST
Gso8g0594 8 5531424 5539630 Gso15g0461 15 4219478 4224480 PCT
Gso8g0594 8 5531424 5539630 Gso8g1482 8 14414013 14418825 PCT
Gso15g0461 15 4219478 4224480 Gso8g0594 8 5531424 5539630 PCT
Gso8g1482 8 14414013 14418825 Gso8g0594 8 5531424 5539630 PCT