Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0589 ATGGCTTCCAATATTCATGATGAATCTGTTTCATCAGCTCCAACACGTGCTTATGAAACTAAACCCAGTTCAAAATCAATACCCCAGCAAAGTGTCATAGACATTGAAGCCACCACACTAGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATCAATGGATCAGCTGGTGAGACTCAGAAAGAAGAGATTGGTATCTGCTTGACATGGAAGGATGTATGGGTGACTGCTTCCAATAGAAAGAGTGGAAGCAAATCAATTCTTCACGAGCTAACTGGTTATGCTAAGCCAGGGCAACTCTTGGCAATAATGGGTCCCTCTGGCTGTGGCAAATCTACTCTACTTGATTCTTTAGCAGGGAGATTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGTCACAAACAAGCACTGTGTTATGGAACCTCAGCATATGTCACACAAGATGATACATTACTCACCACCTTAACGGTTAGAGAAGCAGTGCACTATTCAGCTCAGCTCCAATTACCTGACACCATGTCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTTGTAAAGGCATAAGTGGGGGTCAGAAGAGGAGAGTTAGCATCTGCATAGAGATCCTAACACGCCCAAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATCGCTGCCCTTGCTCAAAATGACCACATTCAGAGAACTGTTATTGCGTCAATCCACCAGCCTAGTAGTGAAGTTTTTCAACTCTTCCATAGCCTTTGTCTTCTGTCTTCGGGTAAAACAGTTTATTTTGGACCTGCTTCTGCTGCAAAGGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGATATTGAAGCGGGTTTAGCAGGAACTGAAAACATACTCACAGAAGAAGTAATCCACATCCTTGTGAACTCATACAAATCATCTGAAAGGAATCAAGAAGTTCAAAATGAAGTAGCTTTACTATCTAAGAAGGACACCAGTTCATTGGATATGAAGAAAGGGAATGCAGGCTTCCTTAATCAATGCTTAGTTCTAACCAAAAGATCGTTCATTAACATGTATCGTGATCTAGGCTATTATTGGTTACGCCTTGTCATATATATTGCATTGGCCATAACTTTAGCCACTGTTTTCTATGATTTGGGAACAAGTTATGACTCAATTAAGGATCGAGGTTCACTTGTTGCATTCATAAATGGATTCATTACTTTCATGACCATTGGTGGATTTCCTTCCTTTGTGGAAGTCATGAAGGTATATCAACGAGAAAGACAAAATGGGCATTATGGTGTGACTGCATTTGTCATTGGGAACACCTTGTCATCAATCCCATACTTGCTAATGGTTACATTCATTCCTGGGGCTATATCTTATTACCTTCCCGGTCTTCAGAATGGATGCGAACATTTTCTGTATTTCATTTGTGTTTTATTTTCAAGTCTCATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGTGTGGTTCCCAACTATCTTATGGGCATCATTGCTGGTTCTGGAATTCAAGGAATCATGCTTTTACTTAGTGGGTTCTTTAAATTGCCAAATGATATTCCTAAGCCAGTTTGGAAGTACCCATTACACTATGTTGCTTTTCATACGTATGCCAACCAAGGAATGTTCAAGAACGAATATAAAGGACTAAGATTTAATACAGATCATCAAGTTGGATCAGGAGGCTCACATGGTTACATAAGTGGTGAAGAGGTTTTAAGAAATACATGGCAAGTTGACACGAGTTACTCAAAGTGGGTTGATCTAGCAATCTTGATTGGAATGATTGTTGTATATCGAGTTTTGTTTTTGGTTATCATCAAGATTAAAGAGAAGATGAAGCCCCTTGTTGTATCATTATCGTGCATGTCAGCCTCTCCCAAGAGAACAATGCAGGTCATGGAAAACCCCAACGCCACTCCTTTACATTGCAGTCCTATCATTAATTGTTACATAATTAACAATATGGCTTGCCTTCATGATCAGTCTCTTTCATCTGCCCCTAGATGTGCTTATGAAACTAAACCCAGTTCAAAATCAGTACTCCAGCAAAATGTCATAGACATTGAAGCCACCACACTAGAAATGGAAGCTTTTAGAGGTCCAAGAAAGATCAATAGAGAAGAAGGTATCTGCTTGACATGGAAGGATGTATGGGTGACTGCTTCTAATAGAAAGAGTGGAAACATATCAATTCTTAAGGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATCATGGGTCCTTCTGGCTGTGGCAAATCCACACTACTTGATACTTTAGCAGGGCGACTAGGTTCAAACACAAGGCAAACCGGGGAGATTCTGATCAATGGACATAAACAATCGCTGGCTTATGGAACCTCTGCATATGTCACACAAGATGATACCTTGTTAACAACCTTAACGGTCAGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTACCAGACACCATGCCCAAAGAAGAGAAGAAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACAAAAGAATTGGAGGGTGGGGTTGTAAAGGAATCAGTGGGGGTCAGAAGAGGCGAGTTAACATCTGCATAGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAGAAGAATTGCTACCTTGGCTCAGAATGACCTCATTCAGAGGACTGTTATTGCTTCTATCCACCAGCCTAGTAGTGAAGTTTTTCAATTTTTCAATAACCTTTGTCTTTTGTCATCAGGTAAAGCAGTTTACTTTGGACCTGCTTCTGGTGTAAGTGAGTTTTTCGCTTCAAATGGTTTTCCCTGTCCTGTTCTCATGAATCCTTCTGATCATTTTCTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAGGTGGATATATCGGGGAATAGAAAAATACCCACAGAAGAAGCAATCCACATTCTTGTAAACTCATATATATCATCTGAAATGAACCAAGAAGTTCAAAACGAAGTAGCTGCACTATCTACAAAGGATATTAGTTCAATAGACTGGAAGAGAGGGCATGCGGGCTTCCTTAATCAATGCCTAGTTCTTACTAAAAGATCGTTCGTGAACATGCGTCGTGATCTAGGCTATTACTGGTTACGCCTTGCCATATTTGTTGCATTGGCAATAGCTTTGGCCACTATTTTCTATGATTTGGGTACAAGTTACGTCTCAATTCAGGATCGAGGTTCACTTGTTGCATTTATTAATGGATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGTCATGAAGGTATTTCAACGAGAAAGGCAAAATGGGCATTATGGTGTCACTGCATTCGTCATTGGGAACACCTTGTCGTCGATTCCATACTTGTTATTGATTACAATTATTCCTGGGGCTATAGCTTATTACCTTCCTGGTCTTCATAATGGATGCGAGCACTTTCTGTATTTCATTTGTGTTTTATTTTCTAGTCTCATGTTAGTGGAGAGTCTTATGATGATAGTTGCGAGCGTTGTTCCCAACTTTCTAATGGGTATCATGACTGGTGCTGGAATTCTAGGAATCATGCTTTTACTTGGCGGGTTCTTTAAATTGCCACATGATATTCCTATCCCGGTTTGGAGATACCCATTACACTTTGTTGCTTTTCACACGTTTGCCAACCGTGGAATGTTCAAGAACGAGTACGAAGGACTAAGATTTGCTTCCAATGAAGTTGGAGGAGGTTACATAAGTGGTGAAGAGGTTTTGAGATATGCATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGATAGGGATGATTTTTCTTTATCGAGTTTTGTTTTTGGTTATCATCAAGGTTAAAGAGAAGGTGAGGCCCGTTGTTGTATCATTATCATGTATGTCAGCGTCTTCCAAGCGAACAATACAAGTCATGGAAAATCCCAACGCCACTCCTTTACATTGA 4191 0.403 MASNIHDESVSSAPTRAYETKPSSKSIPQQSVIDIEATTLEMEAFRGPRKINGSAGETQKEEIGICLTWKDVWVTASNRKSGSKSILHELTGYAKPGQLLAIMGPSGCGKSTLLDSLAGRLGSNTRQTGEILINGHKQALCYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMSKEEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIAALAQNDHIQRTVIASIHQPSSEVFQLFHSLCLLSSGKTVYFGPASAAKEFFASNGFPCPPLMNPSDHLLKTINKDFDQDIEAGLAGTENILTEEVIHILVNSYKSSERNQEVQNEVALLSKKDTSSLDMKKGNAGFLNQCLVLTKRSFINMYRDLGYYWLRLVIYIALAITLATVFYDLGTSYDSIKDRGSLVAFINGFITFMTIGGFPSFVEVMKVYQRERQNGHYGVTAFVIGNTLSSIPYLLMVTFIPGAISYYLPGLQNGCEHFLYFICVLFSSLMLVESLMMIVASVVPNYLMGIIAGSGIQGIMLLLSGFFKLPNDIPKPVWKYPLHYVAFHTYANQGMFKNEYKGLRFNTDHQVGSGGSHGYISGEEVLRNTWQVDTSYSKWVDLAILIGMIVVYRVLFLVIIKIKEKMKPLVVSLSCMSASPKRTMQVMENPNATPLHCSPIINCYIINNMACLHDQSLSSAPRCAYETKPSSKSVLQQNVIDIEATTLEMEAFRGPRKINREEGICLTWKDVWVTASNRKSGNISILKGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQSLAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDTMPKEEKKERADFTIREMGLQDAINKRIGGWGCKGISGGQKRRVNICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIATLAQNDLIQRTVIASIHQPSSEVFQFFNNLCLLSSGKAVYFGPASGVSEFFASNGFPCPVLMNPSDHFLKTINKDFDQDIEVDISGNRKIPTEEAIHILVNSYISSEMNQEVQNEVAALSTKDISSIDWKRGHAGFLNQCLVLTKRSFVNMRRDLGYYWLRLAIFVALAIALATIFYDLGTSYVSIQDRGSLVAFINGFLTFMTIGGFPSFVEVMKVFQRERQNGHYGVTAFVIGNTLSSIPYLLLITIIPGAIAYYLPGLHNGCEHFLYFICVLFSSLMLVESLMMIVASVVPNFLMGIMTGAGILGIMLLLGGFFKLPHDIPIPVWRYPLHFVAFHTFANRGMFKNEYEGLRFASNEVGGGYISGEEVLRYAWQVDMSYSKWVDLAILIGMIFLYRVLFLVIIKVKEKVRPVVVSLSCMSASSKRTIQVMENPNATPLH* 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0589 1396 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 699 - -
Gso8g0589 1396 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 712 1396 - -
Gso8g0589 1396 Pfam ABC-2 type transporter 1094 1305 IPR013525 GO:0016020|GO:0140359
Gso8g0589 1396 Pfam ABC-2 type transporter 392 603 IPR013525 GO:0016020|GO:0140359
Gso8g0589 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 769 1006 IPR027417 -
Gso8g0589 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 313 IPR003439 GO:0005524
Gso8g0589 1396 CDD ABCG_EPDR 64 295 - -
Gso8g0589 1396 Pfam ABC transporter 88 238 IPR003439 GO:0005524
Gso8g0589 1396 Pfam ABC transporter 789 940 IPR003439 GO:0005524
Gso8g0589 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 304 IPR027417 -
Gso8g0589 1396 ProSitePatterns ABC transporters family signature. 912 926 IPR017871 GO:0005524
Gso8g0589 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 769 1015 IPR003439 GO:0005524
Gso8g0589 1396 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 699 - -
Gso8g0589 1396 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 712 1396 - -
Gso8g0589 1396 Gene3D - 769 1013 IPR027417 -
Gso8g0589 1396 Gene3D - 67 324 IPR027417 -
Gso8g0589 1396 Pfam ABC-2 type transporter 270 375 IPR043926 GO:0140359
Gso8g0589 1396 Pfam ABC-2 type transporter 972 1072 IPR043926 GO:0140359
Gso8g0589 1396 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
Gso8g0589 1396 SMART AAA_5 798 987 IPR003593 -
Gso8g0589 1396 SMART AAA_5 96 285 IPR003593 -
Gso8g0589 1396 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0589 Gso-Chr8 5432005 5444080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0589 785 976 Calmodulin-binding Proteins AT2G36910 27.638 3.93e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0589 K05681 - gmx:100794527 1289.25