Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0578 ATGGTTAAGGCTGACGGGTCTTTGCCTCGCCCACACCACGTGGCTTGGCAATCACCTTCTTCAAATTACTTCAGTATGCTGCCTAAGCCCAGCTTACTTGGTCTTCCAACATATCTGAATTCAGGCACTTCCATCTTGCCTGCTGTCAGTACATTTCATGGGCTTGCAGCTCCTTCTATCCCAAGTCTGAAGACCAAGCTAACAAATGAAGTGCAGGGATTCCTTCAGTATCACTATGCTGACACAAGTTTGAAAGAAACACATGTTGGAGGAGCTTTACAAAATGCAAATCCTTCTTCTTTGCAGAAGAGGTTGCTGATCTTCGACCGCTCTGATAATAAGACAAGGTTATTTTATGGTCCTGTCCCTCTTGTCCAGAGTCCAACTGTTACTGCTACAAAGTTTGCTCAAAGTTACGGTGTAAAAGGGGAGGGACAGGCCAGTAATGTGGGTCAAAAGCATCTAGCCAGTTACAGTTTACTGGAAGAGTCTGTTAAGGATCATGCAGTTATTGAAGAAAGTGAAAATCATGAAGATACAGAAGAAATAAATGCATTTCTTTATTCTGATGATGAAAGCAGTGAAGATGACGACGATGATACTTGTGATGAGGTAACAAGTACAGATCATTCTCCTTTGGCAACTAATAAGACTTATGTGATACAAGAGCAATTTAAAGACACTAAGGAGGAGGTTGCTAGCTCTGATTGGCCTAACAAAAGGCTGAAGTTATTTGATGGTGACTATAATAGATCATCGACACCTGTGGACAGGTATAGTTTGGTAAGACCAAATGAAACCTGTGATTGTGTCAGTGATGCTGAATCGAAGAATTCTAGTGGCTGGGCATATTCTGTTGATAAAACTAAAGTAGATAATTCAGTGGCTCACCATATCAAATTTAAAAAGGATAAGATCCGTGAATCGTTGAAAGTTCTCGAGAATTTAATTCCTGGTGCGAAAGGAAAGGAGCCACTGTTAGTCATTGATGGCACTATTGAGTACTTGAAAATTTTGATGTCCCAAACTGGTGCTCTTGGGGTGAAATATCACTAA 1056 0.4091 MVKADGSLPRPHHVAWQSPSSNYFSMLPKPSLLGLPTYLNSGTSILPAVSTFHGLAAPSIPSLKTKLTNEVQGFLQYHYADTSLKETHVGGALQNANPSSLQKRLLIFDRSDNKTRLFYGPVPLVQSPTVTATKFAQSYGVKGEGQASNVGQKHLASYSLLEESVKDHAVIEESENHEDTEEINAFLYSDDESSEDDDDDTCDEVTSTDHSPLATNKTYVIQEQFKDTKEEVASSDWPNKRLKLFDGDYNRSSTPVDRYSLVRPNETCDCVSDAESKNSSGWAYSVDKTKVDNSVAHHIKFKKDKIRESLKVLENLIPGAKGKEPLLVIDGTIEYLKILMSQTGALGVKYH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0578 351 MobiDBLite consensus disorder prediction 188 204 - -
Gso8g0578 351 PANTHER TRANSCRIPTION FACTOR BHLH145 8 351 IPR037546 -
Gso8g0578 351 MobiDBLite consensus disorder prediction 188 210 - -
Gso8g0578 351 PANTHER TRANSCRIPTION FACTOR SAC51 8 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0578 Gso-Chr8 5334722 5338621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0578 91 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 37.549 7.19e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0578 - - gmx:100817942 685.641