Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0571 ATGGACGGCGGGAACCGACCGGAGGCGGAGCGCTGGCTATACACCGCCAACAAGCTCCTGAGCGCGCGTGACCTGCACGGTGCGCGCTCCTTCGCCATCCGCGCGCGTGAGTCGGACCCGACCTACGATGCCTCGGAGCACCTCCTGACGGTCATCGACACGCTCCTCGCCGGCGAGTCGCGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAGATTCTCCGCTACACCACCAACATGGACCACATCGCCGCCCAGTATCGCCGCCTCGCGCTCCTCCTCGACCCTCACCGCAACATGTTCGCCTTCGCCAGCCACGCCTTCTCCCTCGTCAACGACGCCTGGTCCGTTCTCTCCAATTCCGCCAAGAAAGCCATGTACGACAGCGAGCTCCGCTTGCTCACCGCTCCGGCGCCGCCGCAACATCATCCTCTTCCCCCGCAGCCTCAACCCACGCTGAGGCGAAACCCTAGATCGAGGGACGAGCCGAATCCTAACCGTCCCGAGTCGGCTGAGTCGAGTCGGCAGACTCGGACCGTGGAAACTGATACAGGAACAAGTTTCTGGACCTCGTGTCCTTATTGTTATGTGCTGTATGAATATCCCAAGGTTTATGAGGAGTGTACCTTACGGTGCCAGAGTTGTCGGAGAGGGTTTCATGCGGTGGTGATACGGTCGCCGCCGCCGTTGAGTGGGAAAGACGGTTCTTATTGTAGTTGGGGGTTTTTCCCGTTAGGGTTTTCTGGGAATTCGAAGGATGTGAACGGGCATGCCTCGAATTGGAACCCGTTTTCGCCTTTGTTTCCTTGCCCCTTGAAGGGGTCGTCCAAAAGGAGGCCTCAGAGGAACTGGGCTTACTATGACGACGATGCTGCGGCCGCGTTTATAGAGTTGTCGGACCCGAGTGACGACGATTCCGGTGATGGGGACTGGAGGATTGGGAAGAATAGGGGGAGGAAGAGGACTAGAGGGAAGAAAAATTCTGGTGATGGTAGGAGGGAGCCTGTGGAGAGAACTAAGAGGGGTGCTCATGTAGGAAATGATAATGTGGGTTCTGGTGCTAGTGGTAATGTTAATGCTAATGCTGCCTCTGCTGTGCTGGCTGGTGCGAGGGGGGAGTCTAGTAAGAAGGCTGCATTGGGTGGTTCGAGGAGGCGGGGGGCAGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCACAACCGCGAAGGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGCTTAA 1368 0.5694 MDGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTYDASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRLALLLDPHRNMFAFASHAFSLVNDAWSVLSNSAKKAMYDSELRLLTAPAPPQHHPLPPQPQPTLRRNPRSRDEPNPNRPESAESSRQTRTVETDTGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGHASNWNPFSPLFPCPLKGSSKRRPQRNWAYYDDDAAAAFIELSDPSDDDSGDGDWRIGKNRGRKRTRGKKNSGDGRREPVERTKRGAHVGNDNVGSGASGNVNANAASAVLAGARGESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVHNREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0571 455 MobiDBLite consensus disorder prediction 141 155 - -
Gso8g0571 455 MobiDBLite consensus disorder prediction 371 390 - -
Gso8g0571 455 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 455 - -
Gso8g0571 455 Gene3D DnaJ domain 57 139 IPR036869 -
Gso8g0571 455 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Gso8g0571 455 MobiDBLite consensus disorder prediction 300 359 - -
Gso8g0571 455 MobiDBLite consensus disorder prediction 329 346 - -
Gso8g0571 455 CDD DnaJ 68 122 IPR001623 -
Gso8g0571 455 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Gso8g0571 455 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Gso8g0571 455 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 455 - -
Gso8g0571 455 Pfam DnaJ domain 68 130 IPR001623 -
Gso8g0571 455 SMART dnaj_3 67 125 IPR001623 -
Gso8g0571 455 MobiDBLite consensus disorder prediction 138 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0571 Gso-Chr8 5268836 5271902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0571 8 454 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 44.924 7.08e-110 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0571 - - gmx:100788733 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1538 7 37178631 37181956 Gso8g0571 8 5268836 5271902 GST
Gso8g0571 8 5268836 5271902 Gso15g0495 15 4445561 4447532 PCT
Gso8g0571 8 5268836 5271902 Gso11g2812 11 43857642 43859527 PCT
Gso15g0495 15 4445561 4447532 Gso8g0571 8 5268836 5271902 PCT
Gso11g2812 11 43857642 43859527 Gso8g0571 8 5268836 5271902 PCT