Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0555 ATGGAAACGAGGATGTTGCGGCTTTCGATTCAACGAGTGAGGAAGTTGAACTTTCTGAGGCCTCAGATCTCTGCTTTGGGAAGGTCCCATTTGTCAACTGCTGCTGAACCATCTTCCAGTAAGAGCAATCCACCTAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAAGCATCAACTGTCATTGATGTTATAAACCCGGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACGCATGAAGAGTTTAAGGCAGCTGTATCTGCAGCAAAGGAAGCATTTCCATCATGGCGTAACACTCCAATTACAACACGCCAACGTGTTATGTTGAAGCTTCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTTTGAATGTGACCACTGAACAAGGAAAGACATTGAAAGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGAATGGCTACTCTACAAATGGGGGAGTATGTTTCCAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGCGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTATGGCTGTTACCTGCGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGATGATGAAAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCCAAAAATCATGCGATTGTCATGCCAGATGCAAATGTTGATGCTACTCTTAATGCTTTAGTTGCTTCTGGTTTTGGTGCTGCTGGACAAAGGTGTATGGCTCTCAGCACAGTTGTTTTTGTTGGTGGCTCAAAACCATGGGAGGATAAACTTTTAGAGCGTGCCAAAGCTCTAAAAGTAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGATTAGTTCAATCTGGGGTTGAAAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGTCCAACCATCTTATCAGATATCAATGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGTCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAAGCCATAAACATTATCAACAGTAACAAGTACGGAAACGGTGCTTCTATATTTACTACATCCGGTGTTGCTGCGAGGAAATTTCAGACTGAGATAGAGGCTGGACAGGTTGGCATCAATGTACCCATTCCAGTTCCTTTGCCCTTCTTCTCATTTACCGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAAGCAGGGGTTAACTTCTATACACAGATCAAGACAATAACACAGCAATGGAAGGATTCAACTGGTGGTAGCAGGATTAACTTGGCAATGCCAACCTCTCAAAAATAA 1626 0.4287 METRMLRLSIQRVRKLNFLRPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVIDVINPATQEVVSQVPLSTHEEFKAAVSAAKEAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDENIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVASGFGAAGQRCMALSTVVFVGGSKPWEDKLLERAKALKVNAGTEPDTDLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSRINLAMPTSQK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0555 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 292 492 IPR016163 GO:0016620
Gso8g0555 541 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 317 328 IPR016160 GO:0016491
Gso8g0555 541 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 28 541 - -
Gso8g0555 541 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 49 523 IPR010061 GO:0004491
Gso8g0555 541 SUPERFAMILY ALDH-like 43 524 IPR016161 GO:0016491
Gso8g0555 541 Pfam Aldehyde dehydrogenase family 55 519 IPR015590 GO:0016491
Gso8g0555 541 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 28 541 IPR010061 GO:0004491
Gso8g0555 541 CDD ALDH_F6_MMSDH 47 523 IPR010061 GO:0004491
Gso8g0555 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 500 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0555 Gso-Chr8 5136711 5143957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0555 5 507 Aldehyde Dehydrogenase Gene Family AT2G14170 80.517 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0555 K00140 - gmx:100811544 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1557 7 37342637 37349183 Gso8g0555 8 5136711 5143957 GST