Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0554 ATGCATGTCCAGTTATCCAATCTCAATTTCTCCTATCACTTAGTAGTGATGTTGTTATCTATTTTCTTCCTCTTGATTATCCCATATGCTTCCTCTTTGTCCTTTAACTTCCCTAGTTTTGATCCTAATGACAACAGAATAATATATAACAGATCAGCAAACGCTGTAGCACCAAATATCCAACTCACAACAAACCAAGCTGACAAGGGCATGAATGGAAGCATTGGTAGAGCCACTTATTACCAACCTATGCACCTGTGGGACAAAGCCACTGGAACTCTCACAGATTTCAGTACCAATTTCTCTTTTGTCATAAACTCACGAGGTCAAAGTGTATATGGAGATGGAATTGCATTCTTCCTTGCCCCTGCTGGTTCAATGGTTCCTAATTCCACATTAGGAGGTACTATGGGTCTGACACTTGATAACCAAATATTGAACTCCACAGACAATCCATTTGTTGCTGTGGAGTTTGATATCTTTGGGAATGACTGGGATCCACCCGGTGAACATGTTGGAATCGACATCAACTCTTTGAGATCTGTTGCTAATGCCACATGGTTGGCTGATATCAAGGGAGGGAAAGTCAACCAGGCTTTGATCAGTTACAACTCCACTTCATTAAATTTAAGCGTTGCGTTCACAGGTTTTAAAAATGGTACCGCTCTGGTACATCATCTATCTGTCATAGTTGATCTGAAACTTTATTTACCAGAATTTGTTACTGTTGGCTTCTCAGCTGCCACGGGAAATTTAACTGCTATACATACTCTCAATTCATGGGATTTTAACTCAACCTCCATTATAGCTCCCAGTCAGAAGAAAAAGGACAAGAAAGCCTTGGCAGTGGGATTGGGAGTTGGTGGATTTGTTTTGATTGCTGGGTTGGGGTTGATTTCAATTCGCTTGTGGAAGAAAACAAGTGAAGAGGAGGATCATGATTTTGAAGAGTATATAGATGAGGATTTTGAAAGGGGGGCAGGACCCCAGAAGTATTCATATGCTGAATTAGCACAAGCAGCTAACGGTTTCAAAGATGAGCACAAGCTAGGACAGGGAGGATTTGGAGGTGTTTATAAGGGTTACCTTAAAGACCTAAAGTCTCATGTAGCCATTAAGAAGGTATCAGAAGGCTCTGATCAAGGGATAAAGGAGTTTGCATCAGAAGTAAGAATTATTAGCCGGTTAAGGCATCGAAATCTTGTGAACTTGATTGGTTGGTGTCATGCAGGGAAAAAGCTCTTGCTTGTGTATGAGTACATGTCAAATGGAAGCTTGGATATTCATCTTTTCAAGAAGCAAAGCATTTTGCAATGGGCGGTGAGGTATAACATAGCTCGAGGATTGGCCTCAGCATTGCTATATTTGCACGAAGAATGGGAACAATGTGTAGTGCATAGAGACATAAAGCCAAGCAACATTATGCTGGATTCAGAGTTTAACGCCAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAAGTGCACAAACTACAGCTTTAGCTGGGACTATGGGCTACATGGCTCCTGAATGTACTTTGGGCTACAGGCCGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATAAACCATAGGGCTCAAGAAAATGAAATAAGTATTGTGCAGTGGGTGTGGGGACTCTATGGAGAAGGGAGAATTCTTGAAGCAGCAGATCAAAGACTAGAAGGGAAATTTGAGGAGGAGCAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGACCATAGTAATAGACCTTCAATAAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCCTTGCCTAATCTTCCATCAAGTTTGCCTGTTCCAACATATCTTGAGCACCCACTGCACTCATCCATATTACCATTCAGCATAAATGCCTCAGAGGAAGGTCAAAGCCAGATCACAGGCTGCAGTTCAAACACAAATTCCTCCGGATTCACCACAACTTCTGATGATGCTTCTCCCTCTGTGTCGCTTATGTACTCACGGCGAAATTGA 2064 0.4181 MHVQLSNLNFSYHLVVMLLSIFFLLIIPYASSLSFNFPSFDPNDNRIIYNRSANAVAPNIQLTTNQADKGMNGSIGRATYYQPMHLWDKATGTLTDFSTNFSFVINSRGQSVYGDGIAFFLAPAGSMVPNSTLGGTMGLTLDNQILNSTDNPFVAVEFDIFGNDWDPPGEHVGIDINSLRSVANATWLADIKGGKVNQALISYNSTSLNLSVAFTGFKNGTALVHHLSVIVDLKLYLPEFVTVGFSAATGNLTAIHTLNSWDFNSTSIIAPSQKKKDKKALAVGLGVGGFVLIAGLGLISIRLWKKTSEEEDHDFEEYIDEDFERGAGPQKYSYAELAQAANGFKDEHKLGQGGFGGVYKGYLKDLKSHVAIKKVSEGSDQGIKEFASEVRIISRLRHRNLVNLIGWCHAGKKLLLVYEYMSNGSLDIHLFKKQSILQWAVRYNIARGLASALLYLHEEWEQCVVHRDIKPSNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTMGYMAPECTLGYRPASKESDVYSFGVVALEIACGRKPINHRAQENEISIVQWVWGLYGEGRILEAADQRLEGKFEEEQIKCLMIVGLWCAHPDHSNRPSIRQAIQVLNFEAPLPNLPSSLPVPTYLEHPLHSSILPFSINASEEGQSQITGCSSNTNSSGFTTTSDDASPSVSLMYSRRN* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0554 687 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Gso8g0554 687 Gene3D Transferase(Phosphotransferase) domain 1 421 635 - -
Gso8g0554 687 Gene3D - 30 282 - -
Gso8g0554 687 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0554 687 Pfam Protein kinase domain 344 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0554 687 CDD STKc_IRAK 350 615 - -
Gso8g0554 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Gso8g0554 687 MobiDBLite consensus disorder prediction 653 687 - -
Gso8g0554 687 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0554 687 CDD lectin_legume_LecRK_Arcelin_ConA 33 266 IPR001220 GO:0030246
Gso8g0554 687 SUPERFAMILY Protein kinase-like (PK-like) 329 638 IPR011009 -
Gso8g0554 687 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Gso8g0554 687 Pfam Legume lectin domain 32 277 IPR001220 GO:0030246
Gso8g0554 687 PANTHER - 17 683 - -
Gso8g0554 687 PANTHER RECEPTOR LECTIN KINASE 17 683 - -
Gso8g0554 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 268 IPR013320 -
Gso8g0554 687 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0554 Gso-Chr8 5122412 5124944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0554 16 632 Receptor kinase-like Gene Family AT5G10530 50.314 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g0554 Pkinase 3.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0554 - - gmx:100783956 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0554 8 5122412 5124944 Gso11g2797 11 43734036 43736476 PCT