Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0553 ATGGCAGCATCTCGTTACTGTAAGAAAACTTATGTACGTGCTTATTTTCTGCATGTAACATTAATATTCTTGCTCCTTGTAATTCCTCGTGCAGCAGCTTCATTAGCCTTCAACTATCAGCAACTTGGTGACACGGGAAACGCCCTCAAGACTTCAGGAGATGTCTATCCTGACCAAGATGTCCTCCTACTCACCCGTTATGAGCCAGATAGTTATGGTAGAGTTACATATTACGAAAATTTGCATCTTTGGGACAAGAACTCAGGAAAAGTCACAGACTTCACTACCCATTTCTCCTTTACCATCAACACCCCCAATAAAACCCATCATGGAGATGGCATCACCTTCTTTCTTGCACACCCAGACTTTCCACAATCGGGCATAGATGGAAGCGGTATCGGTCTTGCGAGCCGCGAACAACTGAAGAATCTGAATTACGCGAAGGATTATCCGTTTGTAGCGGTGGAATTCGATACCTTTGTTAATGACTGGGATCCTAAATATGACCATGTCGGTATCGATGTTAATTCTATCAACACTACTGACACTACGGAATGGTTCACAAGCATGGATGAGAGAGGATATGATGCTGATATTAGTTACGATTCTGCTTCAAACAGATTAAGTGTCACCTTAACTGGATATAAGGATAGTGTCAAAATTAAACAGCACTTATTCTCTGTGGTCAATCTGAGTGATGTCTTACCTGAATGGGTTGAAATTGGCTTCTCTTCAGCAACAGGATTTTTTTATGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGACAAGGAACAACAAAAGGGTGGAAGCAAAATTGGGCTGGTGATAGGGCTGAGTGTTGGACTTGGTGCAGGGCTGAGTGTTTTAATTGTTATTTGGGGGGTAACTTTCCTTGTGAGATGGATGCTGAAGAATAGAGGTTTGGAGGAAGTCTCACTTTTTGATCATGCTATGGACAACGATTTCGAAAGAATGTCTCTACCCAAGAAGTTTTCCTATGAAGAACTTGCCAGAGCAACTAATAACTTTGCAAGAGAAAACAAAATTGGAGAGGGAGGTTTTGGAGCAGTCTACAGGGGACTTATAAGAGAGTTGAACATCCATGTTGCCATTAAGAAGGTATCTCGCAGATCTAGTCAAGGAGTGAAGGAGTATGCATCTGAAGTAAAGATCATTAGCCAACTGAGGCATAAAAATTTGGTTCAACTCTTAGGGTGGTGCCATCAGAACAATGACCTGCTGCTGGTTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTTAAAGGAAAAGGCCTTCTGGCATGGAAAGTGAGATATGATATTGCTAGAGGCCTGGCCTCCGCATTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGGGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTGATGCAAAGCTTGGTGATTTTGGGTTAGCCAGACTAATGGATCATGCAATAGGTTCAAAAACAACTGTTTTAGCAGGAACAATTGGATATTTGCCTCCTGAAGCTGTCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTATTCAGTTTTGGAGTTGCTGCTTTGGAGATAGCCTGTGGTAGAAAGGCAATTGAACCTAATGTGAATGAAGAACAGCTCTATTTGGTGGATTGGGTTTGGGAACTCCATGGCATGGTTGATCTTCTTAAAGCATCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGAGGTTAATGATAGTTGGCCTGTGGTGTACTTACACAGATTTCCATCTGAGGCCTACAATTAGGCAAGTTGTTCAGGTGCTTAATTTTGAAGCTCCACTTCCCACTCTCTCACCACAGGTTCCATCCTTTTCCTATAATTCATCTTTCAGCTCTATGCCCTCTAGGACTTCTGCTTTTGCAAATAACCAATGTGTCTCTTCAACTTCAAGTAGCTTAGGCACTGGATCCTCACAATCGAACACAACTTGTGAAGTCATCATTTCTCCAGCAGCCGCACATTGA 2049 0.4187 MAASRYCKKTYVRAYFLHVTLIFLLLVIPRAAASLAFNYQQLGDTGNALKTSGDVYPDQDVLLLTRYEPDSYGRVTYYENLHLWDKNSGKVTDFTTHFSFTINTPNKTHHGDGITFFLAHPDFPQSGIDGSGIGLASREQLKNLNYAKDYPFVAVEFDTFVNDWDPKYDHVGIDVNSINTTDTTEWFTSMDERGYDADISYDSASNRLSVTLTGYKDSVKIKQHLFSVVNLSDVLPEWVEIGFSSATGFFYEEHTLSSWSFNSSLDKEQQKGGSKIGLVIGLSVGLGAGLSVLIVIWGVTFLVRWMLKNRGLEEVSLFDHAMDNDFERMSLPKKFSYEELARATNNFARENKIGEGGFGAVYRGLIRELNIHVAIKKVSRRSSQGVKEYASEVKIISQLRHKNLVQLLGWCHQNNDLLLVYEFMENGSLDSYLFKGKGLLAWKVRYDIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFDAKLGDFGLARLMDHAIGSKTTVLAGTIGYLPPEAVTRGKASRESDVFSFGVAALEIACGRKAIEPNVNEEQLYLVDWVWELHGMVDLLKASDPSLYGHFDEKEMERLMIVGLWCTYTDFHLRPTIRQVVQVLNFEAPLPTLSPQVPSFSYNSSFSSMPSRTSAFANNQCVSSTSSSLGTGSSQSNTTCEVIISPAAAH* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0553 682 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Gso8g0553 682 PANTHER LECTIN RECEPTOR KINASE 18 681 - -
Gso8g0553 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 265 IPR013320 -
Gso8g0553 682 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Gso8g0553 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Gso8g0553 682 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0553 682 Gene3D - 33 279 - -
Gso8g0553 682 SUPERFAMILY Protein kinase-like (PK-like) 331 640 IPR011009 -
Gso8g0553 682 ProSitePatterns Protein kinases ATP-binding region signature. 353 377 IPR017441 GO:0005524
Gso8g0553 682 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0553 682 Pfam Legume lectin domain 35 271 IPR001220 GO:0030246
Gso8g0553 682 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Gso8g0553 682 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Gso8g0553 682 CDD STKc_IRAK 353 617 - -
Gso8g0553 682 CDD lectin_legume_LecRK_Arcelin_ConA 35 265 IPR001220 GO:0030246
Gso8g0553 682 PANTHER - 18 681 - -
Gso8g0553 682 SMART serkin_6 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0553 Gso-Chr8 5116175 5118623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0553 19 635 Receptor kinase-like Gene Family AT5G10530 45.899 1.21e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g0553 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0553 - - gmx:100783420 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1559 7 37360761 37363111 Gso8g0553 8 5116175 5118623 GST