Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0552 ATGTCTCTCAAGTTTGTGACTTGTATTATTTTTCCTTCCACGCCCCCACCCACTCAAGCAAGAAACATTAACTACATGCAAGCCATATATGTACAATTCCACTTCCACCGCACCAACATCAGTTCTCCAGATATGGCAGCATCTCCATACTGTAAGAACAGTTATGTACATGCTTTTCTTCATGCAACATTAACACTCTTGCTTCTTGTAATGCCTCTTGCAGCTGCTTCATTAGCCTTCAACTATCAGCAACTTGGTGACGCGGGAAACGCCACCCTCAGTATTTCTGGAGATGTCTATCATGAGCAAGAAGTCCTCCAACTCACCAGGTATGAAACATTTAGCTATGGTAGAGTCATATATCACAAACAATTGCATCTTTGGGACAAGAACTCAGGAAAGGTTGCAGACTTCACTACCCATTTCTCTTTTACCATAAACGCCCGAAATAACACCAATTATGCTGATGGCATGACCTTCTTTCTGGCACACCCAAGCTTTCCAGAACTAGATCCAAGAGATGGAGTTGGTATTGGTCTTTTGAGCCGCACTCAACTGCTGAATCCAAATTTCACAAAGGAATATCCATTTGTAGCAGTGGAATTTGATACCTATGTTAATCCCGAGTGGGATCCTAAATATCACCATGTCGGTATCCAAGTTAATTCTTTTGTCACTTCTGTCTCTGACACTACACAATGGTTCACTAGCATGGATCAGAGAGGATATGATGCTGATATTAGTTACGATTCTGCTTCAAACAGATTAAGTGTCAGCTTCACTGGGTATAAGGATAACGTCAAAATTAAGCAAAACTTATCTTCTGTGGTCAATCTGAAAGATAAATTACCTGATTGGGTTGAATTTGGCGTCACTGCAGCAACTGGAATGTATTATGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTTGTCTTCGACAAACATAAGGGTGGGAGCAAAAAAGGCTTGGCAGTGGGGATGGGAATCGGTGGATTTGTTTTGATTGGTGGGACGGGTTTGATTTCACTTGGCTTGTGGAAGAAGTGGAAGAAAGTAGATGAAGAGGAAAATCATATTGTTGAAGAGTATATGGGTGAGGATTTTGAAAGGGGGGCAGGACCCAGAAAGTATTCATATGCTGAATTAGCACATGCAGCTAATGGTTTCAAAGATGAGCACAAGCTAGGACAGGGTGGATTTGGAGGTGTTTATAAGGGTTATCTTAAAGACATAAAGTCTCATGTGGCTATTAAGAAGGTATCAGAAGGCTCTGATCAAGGGATAAAGGAGTTTGCATCAGAAGTGATAATTATTAGCCGGTTAAGGCATCGAAATCTTGTGAACTTGATTGGTTGGTGTCACGAAAGGAAAAAGCTCTTGCTTGTGTATGAGTACATGTCAAATGGAAGCTTGGATATTCATCTTTTCAAGAAGCAAAGCATTTTGCAATGGGCGGTGAGGTATAACATAGCTCGAGGATTGGCCTCAGCATTGCTATATTTGCACGAAGAATGGGAACAATGTGTAGTGCATAGAGACATAAAGCCCAGCAACATTATGCTGGATTCAGAGTTTAACGCCAAACTTGGGGATTTTGGTTTAGCAAGGTTTGTGGACCATGCAAAAAGTGCACAAACTACAGCTTTAGCTGGGACTATGGGCTACATGGCTCCTGAATGTACTTTGGGCTACAGGCCGGCTAGTAAGGAATCAGATGTCTACAGTTTTGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATAAACCATAGGGCTCAAGAAAATGAAATCAGTATTGTGCAGTGGGTGTGGGGACTCTATGGAGAAGGGAGAATTCTTGAAGCAGCAGATCAAAGACTAGAAGGGGAATTTGAGGAGGAGCAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGACCATAACAATAGGCCTTCAATGAGGCAAGCGATTCAAGTGCTTAACTTTGAAGCTCCCTTGCCTAATCTTCCATCAAGTTTGCCTGTTCCTACATATCTTGAAGGCCCCTTGCACTCATACATAGCACCATTCAGCATAACTGCTTCAGAGGAAGGTCAAAGCCAGATCATAAGCTTCAGTTCCAACACAAACTCCATTGGGTTCACCACAAAATCTGATGATGCTTCTCCCTCTGTGTCGCTTCTGTACTCACGGTGA 2202 0.4219 MSLKFVTCIIFPSTPPPTQARNINYMQAIYVQFHFHRTNISSPDMAASPYCKNSYVHAFLHATLTLLLLVMPLAAASLAFNYQQLGDAGNATLSISGDVYHEQEVLQLTRYETFSYGRVIYHKQLHLWDKNSGKVADFTTHFSFTINARNNTNYADGMTFFLAHPSFPELDPRDGVGIGLLSRTQLLNPNFTKEYPFVAVEFDTYVNPEWDPKYHHVGIQVNSFVTSVSDTTQWFTSMDQRGYDADISYDSASNRLSVSFTGYKDNVKIKQNLSSVVNLKDKLPDWVEFGVTAATGMYYEEHTLSSWSFNSSFVFDKHKGGSKKGLAVGMGIGGFVLIGGTGLISLGLWKKWKKVDEEENHIVEEYMGEDFERGAGPRKYSYAELAHAANGFKDEHKLGQGGFGGVYKGYLKDIKSHVAIKKVSEGSDQGIKEFASEVIIISRLRHRNLVNLIGWCHERKKLLLVYEYMSNGSLDIHLFKKQSILQWAVRYNIARGLASALLYLHEEWEQCVVHRDIKPSNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTMGYMAPECTLGYRPASKESDVYSFGVVALEIACGRKPINHRAQENEISIVQWVWGLYGEGRILEAADQRLEGEFEEEQIKCLMIVGLWCAHPDHNNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYLEGPLHSYIAPFSITASEEGQSQIISFSSNTNSIGFTTKSDDASPSVSLLYSR* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0552 733 ProSitePatterns Legume lectins beta-chain signature. 198 204 IPR019825 -
Gso8g0552 733 PANTHER RECEPTOR LECTIN KINASE 62 731 - -
Gso8g0552 733 Gene3D Transferase(Phosphotransferase) domain 1 469 682 - -
Gso8g0552 733 Gene3D Phosphorylase Kinase; domain 1 377 468 - -
Gso8g0552 733 ProSitePatterns Protein kinases ATP-binding region signature. 398 422 IPR017441 GO:0005524
Gso8g0552 733 CDD STKc_IRAK 398 663 - -
Gso8g0552 733 Pfam Protein kinase domain 392 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0552 733 Gene3D - 75 328 - -
Gso8g0552 733 SMART serkin_6 392 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0552 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Gso8g0552 733 PANTHER - 62 731 - -
Gso8g0552 733 ProSiteProfiles Protein kinase domain profile. 392 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0552 733 CDD lectin_legume_LecRK_Arcelin_ConA 89 313 IPR001220 GO:0030246
Gso8g0552 733 Pfam Legume lectin domain 78 314 IPR001220 GO:0030246
Gso8g0552 733 SUPERFAMILY Protein kinase-like (PK-like) 376 682 IPR011009 -
Gso8g0552 733 SUPERFAMILY Concanavalin A-like lectins/glucanases 76 315 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0552 Gso-Chr8 5111625 5114145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0552 67 680 Receptor kinase-like Gene Family AT5G10530 50.238 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g0552 Pkinase 2.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0552 - - gmx:100782884 1268.06