Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0551 ATGGTCTCGGCAGCACCAAATGCAATGTATGCCCAGTTGTCCAACCTTAGTTTCTCCCATCACTTCTTAGTGATGCTGTTATCCATTTTCTTCATCTTCATTATCCCTTGTGCTTTCCCTCTATCCTTTAACATCACTAGTTTCGATCCAAATGGCAAGAGCATAATATATGAGGGATCAGCCAACCCTGTAACACCAGTTATCGAACTCACAGGAAACGTACGGGACATCACAGGTAGAGCCACATATTTCCAACCTATGCACCTGTGGGACAAAGCCACAGGGAATCTCACAGATTTCACTACCCATTTCTCCTTTGTCATAGATTCACGGAACCGAAGTGGATATGGAGATGGGATGGCATTCTTCCTTGCCCCTGCTGGTTTAAAGTTTCCTTATGTCTCCAGAGGAGGTGCTTTGGGTCTGACACTTGAGAACCAACGATTAAACTCCACTGACCCATTTGTTGCTGTGGAGTTTGATATCTATAAGAATTTCTATGATCCACCCGGTGAACATGTTGGAATCGACATCAACTCTTTGAGATCTGTTGCCAATGTCACATGGTTGGCTGATATCAAGCAAGGGAAACTCAATGAGGTTTGGATCAGTTACAATTCTAGTTCATTTAATTTAAGTGTTGTGTTCACGGGTTTTAACAATGACACCATTCTGCGGCAACATCTATCTGCCATAATTGATCTGAGACTTCATTTACCAGAATTTGTTACTGTTGGCTTCTCAGCTGCCACGGGAAGTGATACTGCTATACATAGTGTCAATTCATGGGATTTTAGTTCAACTTTGGCAGCACAAGAAAACATAACAAAGGGAGCAGACACAGTTGCAAGGTCTCCAGCAACCTCCAATATAGCTCCCAGTCAGAAGAAAAAGAATAAGACCGGCTTGGCAGTGGGATTGAGTATTGGTGGATTTGTTTTGATTGGTGGGTTGGGTTTGATTTCAATTGGCTTGTGGAAGAAGTGGAAGAAAGGAAGTGTAGAGGAAGATCTTGTTTTTGAAGAGTATATGGGAGAAGATTTTGGAAGGGGGGCAGGACCCAGGAAGTATTCATATGCTGAATTAACAGAGGCAGCTAATGGTTTCAAAGATGAGCACAAGCTAGGACAGGGAGGATTTGGAGGTGTTTATAAGGGTTATCTTAAAGACATAAAGTCTCATGTAGCTATTAAGAGGGTGTCAGAAGGCTCTGATCAAGGGATAAAGGAGTTTGCTTCAGAAGTAAACATTATTAGCCGGTTAAGGCATCGAAATCTAGTGCACTTGATCGGTTGGTGTCATGCAGGGAAAAAGCTCTTACTTGTGTATGAGTACATGCCAAATGGAAGCTTAGATATTCATCTTTTCAAGAAGCAAAGTTTGTTGAAATGGACGGTGAGATATAACATAGCTCGAGGATTGGCCTCCGCATTGCTATACTTGCACGAGGAATGGGAACAATGTGTTGTGCACAGAGACATAAAGTCAAGCAACATTATGCTGGATTCAGAGTTTAATGCCAAACTTGGGGATTTTGGCTTAGCAAGGTTTGTGGACCATGCAAAAAGTGCACAAACTACAGCTTTAGCTGGGACTATGGGCTACATGGCTCCTGAATGTGCTACCTCGGGCAGGGCTAGTAAGGAGTCAGATGTCTACAGTTTCGGAGTTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCCATAAACCATAGGGCTCAAGAAAATGAAATAAATATTGTGGAATGGGTGTGGGGACTCTATGGAGAAGGGAGAATTCTTGAAGCAGCAGATCAAAGACTAGAAGGGGAATTTGAGGAGGAGCAAATAAAATGCTTGATGATTGTTGGTCTTTGGTGTGCTCACCCTGACCATAACAATAGGCCTTCAATGAGGCAAGCGATTCAAGTGCTTAACTTTGAAGCTCCCTTGCCTAATCTTCCATCAAGTTTGCCTGTTCCTACATATCTTGAAGGCCCCTTGCACTCATTCATAGCACCATTCAGCATAACTTCTTCGAAGGAAGGTCAAAGCCAGATCACAGGCTCCAGTTCCAACACAAACTCCACCGGGTTCACCACAAAATCTGATGATGCTTCTCCTTCTGTGTCGCTTCTGTACTCACGGTGA 2130 0.4315 MVSAAPNAMYAQLSNLSFSHHFLVMLLSIFFIFIIPCAFPLSFNITSFDPNGKSIIYEGSANPVTPVIELTGNVRDITGRATYFQPMHLWDKATGNLTDFTTHFSFVIDSRNRSGYGDGMAFFLAPAGLKFPYVSRGGALGLTLENQRLNSTDPFVAVEFDIYKNFYDPPGEHVGIDINSLRSVANVTWLADIKQGKLNEVWISYNSSSFNLSVVFTGFNNDTILRQHLSAIIDLRLHLPEFVTVGFSAATGSDTAIHSVNSWDFSSTLAAQENITKGADTVARSPATSNIAPSQKKKNKTGLAVGLSIGGFVLIGGLGLISIGLWKKWKKGSVEEDLVFEEYMGEDFGRGAGPRKYSYAELTEAANGFKDEHKLGQGGFGGVYKGYLKDIKSHVAIKRVSEGSDQGIKEFASEVNIISRLRHRNLVHLIGWCHAGKKLLLVYEYMPNGSLDIHLFKKQSLLKWTVRYNIARGLASALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARFVDHAKSAQTTALAGTMGYMAPECATSGRASKESDVYSFGVVALEIACGRKPINHRAQENEINIVEWVWGLYGEGRILEAADQRLEGEFEEEQIKCLMIVGLWCAHPDHNNRPSMRQAIQVLNFEAPLPNLPSSLPVPTYLEGPLHSFIAPFSITSSKEGQSQITGSSSNTNSTGFTTKSDDASPSVSLLYSR* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0551 709 PANTHER RECEPTOR LECTIN KINASE 25 707 - -
Gso8g0551 709 ProSiteProfiles Protein kinase domain profile. 369 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0551 709 ProSitePatterns Legume lectins alpha-chain signature. 239 248 IPR000985 -
Gso8g0551 709 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Gso8g0551 709 Pfam Protein kinase domain 369 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0551 709 Gene3D - 40 281 - -
Gso8g0551 709 PANTHER - 25 707 - -
Gso8g0551 709 MobiDBLite consensus disorder prediction 675 709 - -
Gso8g0551 709 CDD STKc_IRAK 375 639 - -
Gso8g0551 709 SMART serkin_6 369 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0551 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Gso8g0551 709 Gene3D Transferase(Phosphotransferase) domain 1 446 658 - -
Gso8g0551 709 SUPERFAMILY Protein kinase-like (PK-like) 354 660 IPR011009 -
Gso8g0551 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 272 IPR013320 -
Gso8g0551 709 CDD lectin_legume_LecRK_Arcelin_ConA 41 269 IPR001220 GO:0030246
Gso8g0551 709 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Gso8g0551 709 Pfam Legume lectin domain 41 274 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0551 Gso-Chr8 5106226 5108597 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0551 24 656 Receptor kinase-like Gene Family AT5G10530 49.457 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso8g0551 Pkinase 4.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0551 - - gmx:100782344 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1560 7 37364254 37369399 Gso8g0551 8 5106226 5108597 GST
Gso11g2797 11 43734036 43736476 Gso8g0551 8 5106226 5108597 PCT