Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0540 ATGAGCACTTTCATTATGTTGGAGTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAGAAGAGTCCGGGTTACTCCCATGCCATTTCACGAGTTTATAGAAATTCTATTTTCATGCTTTACTCAGTTAAAAAGCAAGTGCCACTACTACCACATGGTGCTAGTCATGGGATATTTCATAGGACGTGTGTGTCAGAAAAATTCTTTAAAAGGTCTCCTCTCAATGTTCCATCATGGAGAGGATTGTGTAAGTCGCGTTGGGAACGGCTACAAACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCCATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACCGTCTTAATTGTGCCTACATTCAAGTCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGTGTGGTACTGAATCAATTTGGTTTAATTAGAAACCTTACAGATGTCAAAGCTTTATCAGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCTCGTCTGAAAGCTCTTGCAAAATATGCTTTTGGGATGGGATTGACTCAGGTTGTACTGTCTACTTTAGCATTTACTGCTTTTGAACTTCCTCCAAATGGAGCTGTTGGAACAAAAATTTTGGAATTCCTTTTCCACTCTAGGCCTGATCTGGTGAACATCAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTTTACAGCTTCTTGCAGAGAGAGGTGAGCTTCCTACAAGATTTGGCTCAGCAACTCTTGGAATACTTCTTTTGCAGGATTTGGCCGTTGTCCCTCTTTTAGTCATACTTCCAATACTAGAGAGCCAGAATATAACTGAGGGAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCACTTGGGGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCTGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCTGGGACTTCACTAGTCACACAGAATTTGGGATTTAGTGACACGCTTGGGGCTTTTTTAGCTGGAGCAATTTTAGCAGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGATTGCTTCTTGGGTTGTTTTTTCTAACTACGGGAACTTCAATCGACATGCAGCTCCTTTTGCGTGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACATTGATCATAACTGCAATTGGTCCTCGAGTTGGGCTTACTTTAAAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTTGTTTTCTCTTTAGCTAATAGGCTTGGGGTGCTTCCCCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAAGCTGGAAGAAGGGCTGCTAGCTTTATTGAAGAAAAATTTGACCCTGAGAATAAACAGAATGTTTCTGAGACGGTTAACTTCAACATTAGTGAACCCGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGGAGATAGTGATGAAGTAGGATGGCCTTACGTGGCATTTGATCTTGACCCCTCAGTAGTAAAGGCAGCTAGAAAAATTGGCTTTCCTGTACTCTATGGGGACGGATCACGTCCAGATGTTCTTCACTCTGCCGGTGTCTCTTCTCCAAAAGCTTTCATGATTATGTATACTGGGAAGAAGAAGACAATTGAAGCTGTTCAGAGGCTAAAATTGAATTTTCCTGCAATCCCAATCTACGCCAGAGCTCGTGATCTCAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCCATTTTGGAAAATGCAGAGACTAGCTTGCACCTGGGTTCTAAGTTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTGGCATTTTTGAGTCAGCTTATTAGAGATTCCATGGAGCTCCAAGCTCAAGAAGGAATCGGCCAATCTGATGATCGTGGATTAGATATTATGAAACCGTTGCAGGTGAGAGTTGCTGTCTCGAGGGAAGCACGTGTACTGGCGGCAACAACTTCACCAGAAGCTGAATTATCAGAAATGAATCAGAATGATCAAGCTTCATCAGTTAGAAATCAAAGGGAAGTAGATCCAGAAGAACAAGATTATGAACTAAATGAAGCTGTGAATTTAGAAGGAAATGGTGTTTTAGTTATCAAACAAAGTAGTGAAGAAAGCTCAATGATTGTAGACCAATCAAACCCTTCTTCCCATACTGCCACTGAGGAACCCTGA 2424 0.4187 MSTFIMLESLAWCQSFKGYDLTKQKSPGYSHAISRVYRNSIFMLYSVKKQVPLLPHGASHGIFHRTCVSEKFFKRSPLNVPSWRGLCKSRWERLQTNVAYDVAGAVEVIHDLGLDTLTFLAVTVLIVPTFKSIKASPILGFFCAGVVLNQFGLIRNLTDVKALSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVVLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAERGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTVAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLKESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKFDPENKQNVSETVNFNISEPVVILGFGQMGQVLANFLSNPLASGGDSDEVGWPYVAFDLDPSVVKAARKIGFPVLYGDGSRPDVLHSAGVSSPKAFMIMYTGKKKTIEAVQRLKLNFPAIPIYARARDLKHLLDLKKAGATDAILENAETSLHLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQEGIGQSDDRGLDIMKPLQVRVAVSREARVLAATTSPEAELSEMNQNDQASSVRNQREVDPEEQDYELNEAVNLEGNGVLVIKQSSEESSMIVDQSNPSSHTATEEP* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0540 807 Pfam TrkA-N domain 537 660 IPR003148 GO:0006813
Gso8g0540 807 MobiDBLite consensus disorder prediction 738 754 - -
Gso8g0540 807 Pfam Sodium/hydrogen exchanger family 118 503 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso8g0540 807 Gene3D - 536 704 - -
Gso8g0540 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 86 750 - -
Gso8g0540 807 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 534 679 IPR036291 -
Gso8g0540 807 ProSiteProfiles RCK N-terminal domain profile. 536 668 IPR003148 GO:0006813
Gso8g0540 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 86 750 - -
Gso8g0540 807 MobiDBLite consensus disorder prediction 734 764 - -
Gso8g0540 807 MobiDBLite consensus disorder prediction 785 807 - -
Gso8g0540 807 Gene3D - 111 510 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0540 Gso-Chr8 4978645 4988705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0540 1 752 Inorganic Solute Cotransporters AT4G04850 71.616 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0540 - - gmx:100806734 1499.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1568 7 37445645 37456875 Gso8g0540 8 4978645 4988705 GST