Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0529 ATGGTTTTTCAAATAAAAAGGGATATTCTCATGCATGCCTTCTGGTGTTCTTCCTTACTCAGTTTCTGCATGGTAGTAGTAGCTCATGGCGTTGAAAGCGATATATCCTGCTTAAAATCAATTAAGAACACCTTAGAAGACCCACATAACAAATTATCAAGTTGGAAGAACTTCAACAACAAAACCAACGGTTTCATATGCGATTTCGTTGGCGTTGAATGCTGGCACCCTGGCGAGAATAAAGTGCTACATCTCAACCTCACAAACATGGGTCTGAAGGGTGAGTTTCCACGTGATCTTCGGGATTGCCCTTCATTGACATCCTTAAACCTTTCACACAACGAGCTCACAGGACCCATCCCATCTGATATATCCACATTACTCCCTTATGCTACTTCCATTGACCTATCAAATAACAAGTTTAATGGGGAAATTCCACCAAGTTTGGGTAACTGCAGTTACCTGACTTCTCTTAGACTTGATAACAACATGTTAAGTGGTCAAATCCCACAACAACTTGAACAGCTTCCTAGGCTTAGAAAAATCTCTTTTGTCAACAATAATTTATCAGGGCCGGTTCCTCTGTTCCAACCTGGGTTAACTTGTGTTGATTGTTATGCCAATAACAGAGAACTTTGTGGAGGGCCTTTGCCACCATGTGGGTCAAGCGATGATTTCACTGAAACATTCAAGAAGGGCCTTGCTATTGGCTATGCTTTTTCGGTGACTTCTGTTATTGTCATTTATATCTCCTACTTTGCACCTTGGGAACAATCAGAATCAAAGCATAAAACAAATTACAAGGCTAAAGAATTCCGCAAATATATTTGCTCCATCGCAGGGAGGAAGACACCAACTGAACCTCATACCGAACAAGAATTGCAACCTCTGCAGTTGCAAGAGAAAGCTATCAAAGAGATTTCTGTAGTGACAGACAGAATGAAGTCAACAATGAGGCTCAACGAAGTCAGAGATGCAACTGATTGCTTTTCCATAGACAATGCCATTGGGATGGGGAAAATTGGAATAATGTACAAGGGAAGGTTACCAAATGGTTGGAACCTTGCGATCAAGAGACTATTCGATTCTAAACTATTTAAGAGGCAATTTCTTTTAGAAATAAGAATTTTGGGCAAGTACAGACACAAAAATATAGTTCCCCTGCTTGGGTTCTGTGTGGAAGGAAAGGAAAGGATTCTGGTATACCAATACATGTCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAAGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAATAGCTCTTGGGGTAGCAAGAGGCTTATCCTGGCTCCATCATATCTGTGATTTGCATGTTGTGCATCGTAATATAAGTTCGGGATGTGTCTTGCTAGATAAGAATTTTGAACCCAAAATATCCAATTTTGGAAATGCCAAGTTTATCAATCCCAACATTGAGGACAGTGCAAGCACAACATTTTATGTAAGCGACGGGAAGAAGGATGTCTATGACTTTGGTAGTTTGCTTTTTGAGCTAATCACAGGGAAAACATTGAAGGAATTATCATGTTCATTCAATACTACTAACCTATCTGGTAACCCTTCTAATTTTTATAATGCAATTGAGGAATCTCTAATTGGGGAAGGTTTTGAAAATGAGGTCTACACTCTCATCAAAGTAGCATGTAAGTGTGTTAAGCCTTTCCCAGATGAAAGACCAACGATGCTTGAAGTTTATAACTATATGATCGATATATGGGGAGAGCGACATAGAATAAGTGATGGTTCTGACACACTCAACGTATCTAGTTCTTCTACTAGTGTAGATGAAATTGTTGAGCTATGA 1839 0.3948 MVFQIKRDILMHAFWCSSLLSFCMVVVAHGVESDISCLKSIKNTLEDPHNKLSSWKNFNNKTNGFICDFVGVECWHPGENKVLHLNLTNMGLKGEFPRDLRDCPSLTSLNLSHNELTGPIPSDISTLLPYATSIDLSNNKFNGEIPPSLGNCSYLTSLRLDNNMLSGQIPQQLEQLPRLRKISFVNNNLSGPVPLFQPGLTCVDCYANNRELCGGPLPPCGSSDDFTETFKKGLAIGYAFSVTSVIVIYISYFAPWEQSESKHKTNYKAKEFRKYICSIAGRKTPTEPHTEQELQPLQLQEKAIKEISVVTDRMKSTMRLNEVRDATDCFSIDNAIGMGKIGIMYKGRLPNGWNLAIKRLFDSKLFKRQFLLEIRILGKYRHKNIVPLLGFCVEGKERILVYQYMSNGRLSKWLHPLESEVTLKWPQRIKIALGVARGLSWLHHICDLHVVHRNISSGCVLLDKNFEPKISNFGNAKFINPNIEDSASTTFYVSDGKKDVYDFGSLLFELITGKTLKELSCSFNTTNLSGNPSNFYNAIEESLIGEGFENEVYTLIKVACKCVKPFPDERPTMLEVYNYMIDIWGERHRISDGSDTLNVSSSSTSVDEIVEL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0529 612 Gene3D Transferase(Phosphotransferase) domain 1 405 595 - -
Gso8g0529 612 SUPERFAMILY Protein kinase-like (PK-like) 318 591 IPR011009 -
Gso8g0529 612 ProSiteProfiles Protein kinase domain profile. 330 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0529 612 Gene3D Ribonuclease Inhibitor 31 220 IPR032675 -
Gso8g0529 612 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Gso8g0529 612 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Gso8g0529 612 PANTHER RECEPTOR-LIKE PROTEIN 55 7 581 - -
Gso8g0529 612 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 7 581 - -
Gso8g0529 612 Pfam Protein tyrosine and serine/threonine kinase 332 578 IPR001245 GO:0004672|GO:0006468
Gso8g0529 612 SUPERFAMILY L domain-like 31 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0529 Gso-Chr8 4873249 4876189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0529 19 583 Receptor kinase-like Gene Family AT3G28450 36.271 1.21e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso8g0529 PK_Tyr_Ser-Thr 9.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0529 - - gmx:102664092 1192.18