Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0528 ATGGAATCTTCCAACCAATTCAATGAATCATTTAGGCAAGGTCTTACAGCTGGATATGTCTTTGCTGCAACTTTTGTCATAGTACTTTATATGTCCTCTTGTCTCCCTGCACAACTTATCAAGAACAGGAAGAATAGAACGGGTGGATTTAAGAAAGCAACACAGAAGCGTAAGTTGCCGCTTCAGGAGTTGAAACAAGAAAAAAACAAAGAGAAACGAAAGAGAGCAAGACAGATAGACAGAGATCTTCCTGTGGAGTTGCTAGAGAGAAGAATAAAGATCAATGACATTGGATGGTTGACATGTAGAACGAGCTTCGCAGAACTGTATGAAGCAACCGAACACTTCAGTGAGGACAGTGTCATTGGTGAGGGAAGGACTGGGACAATGTACAAGGCAACACTTCCCAACGGTTGGTTCTTGCTGGCAGTTAAGAAACTCTATGATTCTGAGTTGTGTATCAGAAGTTTCGATTTAGAAATAATGATGGGGAGGTACAGTCACAGAAACATAATGGTCCCCATCAGTTTCTGCATAGAAGAAGAAAAAAATGAAAGAATTTTGGTGTATCATTACATGTCAAATGGAAGAGTTTCTGATTGGTTGAATGATACCACCACATTAGGATGGCCTGCAGTTATAAGGATTGCATTAGGTGTTGCAAGAGGGTTATGCTGCCTTCATCATAGCTTGCATATGGTTCATCTCAGTATTGGTCCCGAGAGTATCTTGTTAGGAAACAATTTTGAGCCAAGAATATCCAATTTTGGAATGGCCATTTTCATAGACTATGATCTAGACAAAAACATTGGATTTGATAAGAAGGATGTGTATGACTTTGGAACTTTGCTTTTTGAGGTGATTAGGGGGAAGGCATTCGGCCAAACAAGTAAATGTTTTAGCAATGCTAATACTAATGGTCCTTTTACAACTTACACATATGCTACTAATCTGTTCGAGGACCCTTTTGGCTTCTATGATGCCGTGGATAAATGTCTAAATGAGATAGAATTTGAAGATGAGGTTTCTGCTTTACTCAGAGTTGCATGTGACTGTGTTCATCCTTTACCTCCTAAAAGGCCCACGATGCTTGAAGTGTATAGTAAGATGAGCAACATATGGGAGAGAGATGGCCTTTTTGAAGATTCTTCCACGTTCTAG 1161 0.3971 MESSNQFNESFRQGLTAGYVFAATFVIVLYMSSCLPAQLIKNRKNRTGGFKKATQKRKLPLQELKQEKNKEKRKRARQIDRDLPVELLERRIKINDIGWLTCRTSFAELYEATEHFSEDSVIGEGRTGTMYKATLPNGWFLLAVKKLYDSELCIRSFDLEIMMGRYSHRNIMVPISFCIEEEKNERILVYHYMSNGRVSDWLNDTTTLGWPAVIRIALGVARGLCCLHHSLHMVHLSIGPESILLGNNFEPRISNFGMAIFIDYDLDKNIGFDKKDVYDFGTLLFEVIRGKAFGQTSKCFSNANTNGPFTTYTYATNLFEDPFGFYDAVDKCLNEIEFEDEVSALLRVACDCVHPLPPKRPTMLEVYSKMSNIWERDGLFEDSSTF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0528 386 Coils Coil 61 81 - -
Gso8g0528 386 Gene3D Transferase(Phosphotransferase) domain 1 272 382 - -
Gso8g0528 386 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 104 380 - -
Gso8g0528 386 Pfam Protein tyrosine and serine/threonine kinase 119 305 IPR001245 GO:0004672|GO:0006468
Gso8g0528 386 SUPERFAMILY Protein kinase-like (PK-like) 106 371 IPR011009 -
Gso8g0528 386 ProSiteProfiles Protein kinase domain profile. 116 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0528 386 Gene3D Transferase(Phosphotransferase) domain 1 193 271 - -
Gso8g0528 386 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 104 380 - -
Gso8g0528 386 Gene3D Phosphorylase Kinase; domain 1 86 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0528 Gso-Chr8 4869610 4872304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0528 103 373 Receptor kinase-like Gene Family AT5G07280 31.579 4.94e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso8g0528 Pkinase 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0528 - - gmx:102663800 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0528 8 4869610 4872304 Gso11g2764 11 43478172 43479090 PCT
Gso11g2764 11 43478172 43479090 Gso8g0528 8 4869610 4872304 PCT