Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0527 ATGTGTACGTGCAGCGAAATGGGTTTCCAAATAAAAAGGAGTATTGTGATCGAGAGATTCTTGTGTGGCTTGTTACTGGGTGTCTTAATGGTAGGTCACGGTACTGACACTGATGTATTCTGTTTAAGTTCCATTAAGGAATCCTTGGAAGACCCGCATGATTACTTTTCCAGTTGGAAGTTCAACGACGTAAACATATGTGTATTTGTTGGTGTTGAATGCTGGCAACATGGGGAGAATAAAGTGCTAAATCTCAACCTCACAAACATGGGTCTGAAGGGTGAGTTTCCACGAGGCCTTAGGGGTTGCTCTTCGTTGGTAGGCTTAGACCTTTCACACAACGAGCTCACAGGACCCATCCCATCTGATATATCCACATTACTCCCTTATGCTACTTCCATTGACCTCTCAAATAACAAGTTTAATGGGGAAATTCCACCAAGTTTGGCTAACTGCAGTTACCTGAATTCTCTTAGACTTGATAACAACATGTTAAGCGGTCATATCCCACAAGAACTTGGGCAGCTTCAAAGGATTAGAAACATTTCTTTTGCCAACAATAATTTATCAGGGCCGTTGCCTTTGTTCCGGGATGGCGTGACTAGTGCTGAAGCTTATGCGAATAATACCCAACTTTGTGGAGGGCCTTTGCCACCCTGCTCAAGCGATGATTTCCCTCAATCATTCAAGGATGGCCTTGTTGTTGGCTATGCTTTTTCGCTGACTTCTTCAATTTTCCTTTATATGTTCCTCTGTAAACCTTGGCATCAGTCAAAGCATAAAAGAAACAACAACCACTGGAATAAGGTTAAAGAAATCGGCAAATATATTTGTTCCATCTCAGGGAGGAAGACACCTTCTGAAGCTGACCCCACACACCAATTTCAAGCTCTGCACTTGCAGGATAAAGCTATGAAAGAGATCTCTCTAGTAATGGAAAGAATGAAGTCCACGATGAGTTTGACCGAAATCAAAGATGCAACAGACTGCTTTTCATTAGAAAATGCCATTGGGATGGGGAAAATTGGAATAATGTATGAGGGAAGGCTAACTGATGGTTCGAACCTTGCCATTAAGAGGCTTTTTGGTTCTAAACAATTTAAGAAGGAATTTCTTTTGGAAATAAGAATTCTGGGTAAGTACAAACACAAAAATATAGTTCCCCTGCTTGGATTCTGTGTAGAAAGAAATGAGAGGATTCTGGTATACCAACACATGCCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAAGTGAAGTTACAAGATTGAATTGGCCTCAGAGGATCAAAATAGCTCTTGGGGTAGCAAGAGGCTTATCCTGGCTCCATTATACCTGCAATTTGCATGTTGTGCATCGTAATATAAGTTCGGAGTGTGTCTTGCTAGATAAGAATTTTGAACCCAAAATATCCAATTTTGGAAAGGCCAAGTTTATGAATCCCAACATTGAGGATGGTGCAAGCACGATATTTTATGTAAGTGATGGGAAGAAGGATGTCTATGATTTTGGTAGTTTGATTTTTGAGCTAATCACAGGGAAAACATTTAACGAGTTGTCGCGTTCATCATACAATGCTACTAACCTGTCTGGCAACCCATCGAATTTTTATGATGCAATTGAGGAATCTCTCATTGGGGAAGGTTTTGAAAATGAGGTCTACACTCTCATCAAAGTTGCATGTAAGTGTGTTAAGCCTTTCCCAGATGAAAGACCAACGATGCTTGAAGTTTATAACTATATGATCGATATATGGGGAGAGCGACGTAGAATAAGTGATGGTTCTGACACACTCAACGTATCTAGTTCTTCTACTAGTGTAGATGAAATTGTTGAGCTATAA 1848 0.4037 MCTCSEMGFQIKRSIVIERFLCGLLLGVLMVGHGTDTDVFCLSSIKESLEDPHDYFSSWKFNDVNICVFVGVECWQHGENKVLNLNLTNMGLKGEFPRGLRGCSSLVGLDLSHNELTGPIPSDISTLLPYATSIDLSNNKFNGEIPPSLANCSYLNSLRLDNNMLSGHIPQELGQLQRIRNISFANNNLSGPLPLFRDGVTSAEAYANNTQLCGGPLPPCSSDDFPQSFKDGLVVGYAFSLTSSIFLYMFLCKPWHQSKHKRNNNHWNKVKEIGKYICSISGRKTPSEADPTHQFQALHLQDKAMKEISLVMERMKSTMSLTEIKDATDCFSLENAIGMGKIGIMYEGRLTDGSNLAIKRLFGSKQFKKEFLLEIRILGKYKHKNIVPLLGFCVERNERILVYQHMPNGRLSKWLHPLESEVTRLNWPQRIKIALGVARGLSWLHYTCNLHVVHRNISSECVLLDKNFEPKISNFGKAKFMNPNIEDGASTIFYVSDGKKDVYDFGSLIFELITGKTFNELSRSSYNATNLSGNPSNFYDAIEESLIGEGFENEVYTLIKVACKCVKPFPDERPTMLEVYNYMIDIWGERRRISDGSDTLNVSSSSTSVDEIVEL* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0527 615 Gene3D Transferase(Phosphotransferase) domain 1 406 598 - -
Gso8g0527 615 SUPERFAMILY Protein kinase-like (PK-like) 313 582 IPR011009 -
Gso8g0527 615 Pfam Protein tyrosine and serine/threonine kinase 332 581 IPR001245 GO:0004672|GO:0006468
Gso8g0527 615 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Gso8g0527 615 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 13 584 - -
Gso8g0527 615 Gene3D Ribonuclease Inhibitor 35 220 IPR032675 -
Gso8g0527 615 ProSiteProfiles Protein kinase domain profile. 331 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0527 615 PANTHER RECEPTOR-LIKE PROTEIN 55 13 584 - -
Gso8g0527 615 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
Gso8g0527 615 SUPERFAMILY L domain-like 36 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0527 Gso-Chr8 4865596 4868319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0527 28 598 Receptor kinase-like Gene Family AT1G69990 33.553 6.03e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gso8g0527 PK_Tyr_Ser-Thr 2.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0527 - - gmx:100819209 1232.62