Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0511 ATGGGAGGTTCCACTAACCCCCTATCTCTCTTCCTTCTCTGCTTCACCACTTTTCTCACTCTCTTTGAAGTTTCAATCTCCACAGACACCTTAACAAGTTCACAATCCCTCCGAACAAACCAAACCCTCCTCTCCCCAAACGCGATTTTTGAACTGGGTTTTTTTTCCTACACTAATTCCACCTGGTACTTGGGCATTTGGTACAAAACCATCCACGACAGAGATAGAACAGTGGTGTGGGTCGCAAACCGAGACATCCCACTTCAAACCTCCCTCGGATTCCTCAAAATAAACGACCAAGGAAACCTCGTCATCATAAACCAATCCCAGAAGCCCATATGGTCCTCAAATCAAACCACAACAACACCCTCCAATCTAATTCTTCAGCTTTTCGATTCGGGAAACCTGGTTCTCAAAGAACCAAACGAGAATGACCCAAAGAAAATTCTCTGGCAGAGCTTCGATTACCCAACAGACACCTTGTTACCGGGCATGAAACTAGGTTGGAACTTCGACACAGGCATAGAAAAGCACATAACCTCGTGGCGTGCCACGAACGAAGACCCTTCAAGCGGGGATTTTTCCTTCAAGCTCGATCCACGTGGCCTTCCGGAAATATTCCTCTGGAACAAGAACCAGAGAATCTACCGTAGCGGCCCTTGGAACGGCGAGAGATTCAGCGGGGTGCCCGAGATGCAACCCAACACAGATTCCATCAAATTCACGTTCTTTGTGGACCAACACGAAGCTTACTACACTTTCTCAATTGTGAACGTTTCTTTGTTTTCTAGACTCTCTGTGAACTCAATTGGGGAACTCCAACGCCTCACGTGGATCCAAAGCACACAGGTGTGGAACAAATTCTGGTATGCTCCAAAGGACCAATGCGACAACTACAAAGAGTGCGGGGCGTACGGGGTCTGTGACACGAACGCGTCACCGGTGTGTCAGTGTATCAAAGGGTTCCGGCCGAGGAACCCGCAGGCGTGGAATCTGCGAGACGGGTCTGATGGGTGTGTGAGGAACACGGAATTGAAATGTGGGAGTGACGGGTTTCTGCGAATGCAGAATGTGAAGTTGCCTGAAACAACGTTGGTGTTTGTGAACAGGAGCATGGGGATTGTGGAGTGTGGAGAATTGTGTAAGAAGAATTGTTCTTGCAGTGGTTATGCGAATGTTGAGATAGTGAATGGAGGGAGTGGGTGTGTGATGTGGGTTGGGGAGCTTTTGGATGTGAGGAAATACCCCTCGGGAGGGCAAGATCTTTATGTCAGATTGGCTGCTTCTGATGTAGATGACATAGGGATTGAAGGTGGTTCTCACAAGACAAGTGATACAATTAAGGCTGTTGGCATTATAGTTGGCGTTGCAGCTTTTATACTATTGGCATTGGCCATCTTTATCTTGTGGAAGAAGAGGAAATTGCAGTGTATATTGAAATGGAAGACAGATAAAAGAGGGTTTTCAGAAAGAAGTCAGGATTTGTTAATGAATGAGGGAGTGTTTTCAAGTAACAGAGAACAGACAGGTGAAAGTAACATGGATGACCTAGAGTTACCATTGTTTGATTTTAACACAATAACAATGGCTACAAACAACTTCTCTGATGAAAACAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAAAGGCAGGTTGATGGAAGGTCAGAACATTGCTGTGAAGAGATTATCAAAAAATTCCGGGCAAGGAATTGACGAGTTTAAGAACGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTTGTTCGGCTTCTTGGTTGCAGCATTCAGATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTGTTTGACAAAACAAAAAGATCCTCACTGGATTGGCAAAGGCGATTCAACATTATATGTGGAATTGCTAGAGGGCTCCTTTATTTGCACCAAGATTCCAGATTTAGGATCATCCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTGGCACCGATCAGACAGAAGCAAATACCATGAGAGTTGTTGGAACATATGGTTACATGTCCCCTGAATACGCTATGGATGGGATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGCTGGAGATCATAAGTGGAAAAAAGAACAGAGGATTCTATTCCGCGAACAAAGAATTGAATCTTCTAGGGCATGCGTGGAAGCTGTGGAAAGAAGAAAATGCTTTGGAACTGATTGATCCGTCGATCGACAATTCATATTCAGAATCTGAAGTTCTTAGATGCATACAAGTCGGTCTCTTATGCGTGCAAGAGCGTGCGGAAGATAGGCCAACAATGGCTTCTGTGGTCTTGATGCTGAGTAGTGACACTGCATCAATGTCACAACCCAAAAACCCTGGATTTTGTCTAGGAAGGAATCCTATGGAAACTGATTCTTCTTCAAGTAAACAAGAAGAATCATGCACTGTGAACCAAGTCACTGTCACAATGCTAGATGCCAGGTAG 2562 0.4434 MGGSTNPLSLFLLCFTTFLTLFEVSISTDTLTSSQSLRTNQTLLSPNAIFELGFFSYTNSTWYLGIWYKTIHDRDRTVVWVANRDIPLQTSLGFLKINDQGNLVIINQSQKPIWSSNQTTTTPSNLILQLFDSGNLVLKEPNENDPKKILWQSFDYPTDTLLPGMKLGWNFDTGIEKHITSWRATNEDPSSGDFSFKLDPRGLPEIFLWNKNQRIYRSGPWNGERFSGVPEMQPNTDSIKFTFFVDQHEAYYTFSIVNVSLFSRLSVNSIGELQRLTWIQSTQVWNKFWYAPKDQCDNYKECGAYGVCDTNASPVCQCIKGFRPRNPQAWNLRDGSDGCVRNTELKCGSDGFLRMQNVKLPETTLVFVNRSMGIVECGELCKKNCSCSGYANVEIVNGGSGCVMWVGELLDVRKYPSGGQDLYVRLAASDVDDIGIEGGSHKTSDTIKAVGIIVGVAAFILLALAIFILWKKRKLQCILKWKTDKRGFSERSQDLLMNEGVFSSNREQTGESNMDDLELPLFDFNTITMATNNFSDENKLGQGGFGIVYKGRLMEGQNIAVKRLSKNSGQGIDEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKTKRSSLDWQRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYSANKELNLLGHAWKLWKEENALELIDPSIDNSYSESEVLRCIQVGLLCVQERAEDRPTMASVVLMLSSDTASMSQPKNPGFCLGRNPMETDSSSSKQEESCTVNQVTVTMLDAR* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0511 853 CDD PAN_AP_plant 343 427 - -
Gso8g0511 853 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Gso8g0511 853 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Gso8g0511 853 Pfam Receptor serine/threonine kinase 490 524 IPR022126 GO:0004674
Gso8g0511 853 Gene3D Phosphorylase Kinase; domain 1 508 609 - -
Gso8g0511 853 Pfam Protein tyrosine and serine/threonine kinase 537 803 IPR001245 GO:0004672|GO:0006468
Gso8g0511 853 CDD STKc_IRAK 540 805 - -
Gso8g0511 853 SMART blect_4 34 157 IPR001480 -
Gso8g0511 853 SUPERFAMILY Protein kinase-like (PK-like) 513 805 IPR011009 -
Gso8g0511 853 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Gso8g0511 853 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 852 - -
Gso8g0511 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Gso8g0511 853 Gene3D - 23 154 IPR036426 -
Gso8g0511 853 Pfam PAN-like domain 347 412 IPR003609 -
Gso8g0511 853 PANTHER - 16 852 - -
Gso8g0511 853 Pfam D-mannose binding lectin 77 183 IPR001480 -
Gso8g0511 853 SMART ntp_6 347 426 IPR003609 -
Gso8g0511 853 ProSiteProfiles PAN/Apple domain profile. 347 427 IPR003609 -
Gso8g0511 853 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Gso8g0511 853 PIRSF SRK 4 853 IPR024171 GO:0004674
Gso8g0511 853 Gene3D Transferase(Phosphotransferase) domain 1 610 818 - -
Gso8g0511 853 CDD B_lectin 34 157 IPR001480 -
Gso8g0511 853 SMART serkin_6 534 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0511 853 ProSiteProfiles Protein kinase domain profile. 534 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0511 853 Pfam Domain of unknown function (DUF3403) 807 853 IPR021820 GO:0004674
Gso8g0511 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 223 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0511 Gso-Chr8 4718183 4726143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0511 522 853 Receptor kinase-like Gene Family AT4G11530 58.457 2.72e-135 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso8g0511 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0511 - - gmx:106799702 1704.88