Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0507 ATGACCACCAAACGCCAACATGCAATTCTTCTGCTCCTCTTATTCTTCTGTTCTCACACTTTGTTCTCTCATGCAGCCGATTCCATCACAGAGGACACAGTAATCAGAGACAACGATGGTGGTGACAATTTGGTGTCCAAAGACCTCACCTTTGAAATGGGTTTCTTCGGTTTGGATAATAATAACTCTTCAAGATACGTTGGGATTTGGTACCACGAGATTCCGGTCAAAACATTCATATGGGTTGCAAACAGAGAAAAACCCATCAAAGGAAGAGAAGGTTCGATCCTAATACAAAAAAGCAACGGCAACTTGATTGTTCTCGATGGAGAGAACAACGAGGTGTGGTCAACAAACATGTCAGTTCCAAGGAACAACACAAAGGCTGTTCTTCGTGACGATGGAAACCTCGTTCTCTCAGAACACGACAAGGATGTTTGGCAAAGCTTTGAGGACCCAGTTGATACATTTGTGCCGGGTATGGCACTTCCAGTGAGTGCTGGAACGAACATATTCAGGTCATGGAAATCAGAAACGGATCCTTCACCGGGAAACTACTCAATGAAGGTTGACTCTGAGGGGTCAACGAAACAGATTTTGATTTTGGAGGGAGAGAAGAGAAGAAAGTGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACTGGTGTCTCCGATGTGACAGGAAGCTCTCTATTTGGCTTTACAGTCATCACAGACACTAAAGGAGAGGAATATTTTACATACAAATGGAATAGCCCTGAAAAAGTGAGGTTTCAGATAACTTGGGATGGGTTTGAGAAGAAGTTCGTGTTGGATGCAGATGGGAAACAATGGAATAGGACACAGTTTGAGCCTTTTGATGACTGTGAGAAGTATAACTTTTGTGGTAGTTTTGCAGTGTGTGATACGGGTAATTCTCCTTTTTGTAGTTGCATGGAAGGGTTTGAGCCAATGCATTGGGAGGAGTGGAATAATAGGAATTGGACAAGGGGGTGTGGGAGGAGGACTCCACTGAAGGCTGAGGCTGAGAGAAGTGCTAATAATAGTTCTTCTGGAGCTGATCGTGAGGTGAGTGTTGGAGAAGATGGTTTCTTGGAGCAAAGGTGTACCAAGTTTCCGGATTTCGCACGGTTGGAGAATTTTGTTGGTGATGCGGATTGTCAGAGGTATTGTCTGCAGAATACTTCTTGTACTGCTTATTCATATACTATTGGAATCGGGTGCATGATTTGGTATGGAGAGTTAGTTGATGTTCAACACTCTCAAAATAATCTTGGAAGTTTACTCCACATCCGTCTTGCCGATGCTGATTTAGGCGATGGGGGGAAAAACACCAAAATTTGGATAATATTAGCTGTTGTGGTAGGGCTGATCTGCATTGGAATCGTTGTATTGCTGGTATGGAGGTTTAAGAGAAAACCTAAAGCAGTTTCCTCAGCTTCTGGTTTCAACAACAATAGCGAAATACCAGCCTTTGATCTAACGAGGAGTACAGACTTATCAGAAATTTCAGGTGAGTTAGGCTTGGAAGGGAATCAACTAAGTGGAGCAGAACTTCCATTGTTCCATTTTAGCTGCATTCTAGCAGCAACAAACAATTTCTCGGACGAAAATAAGCTTGGACAAGGGGGATTTGGTCCTGTCTACAAGGGGAAAATTCCAGGGGGAGAGGATGTAGCTGTCAAGAGGCTTTCAAGAAAGTCTAGCCAAGGTTTAGAGGAGTTCAAGAATGAAATGGTGCTCATAGCCAAACTGCAACATAGAAATCTGGTTAGACTATTGGGGTGTTGCATTCAAGGGGAAGAAAAGATACTGGTATATGAGTACTTGCCAAACAAAAGCTTGGACTGCTTTTTATTTGATCCGGTGAAGCAAACACAACTAGATTGGGCAAAACGCTTTGAAATAATCGAGGGCATTGCAAGAGGGCTACTTTATCTGCACCGGGATTCTAGACTTAGAATAATTCATCGTGATTTAAAAGCAAGCAACATTTTGTTGGATGAAAGCATGAATCCAAAAATTTCAGACTTTGGCTTGGCCAGAATATTTGGGGGAAACCAAAATGAAGCCAACACAAACAGAGTGGTTGGTACATATGGTTATATGTCCCCAGAATATGCAATGGAAGGTCTGTTTTCAATCAAATCTGATGTCTATAGTTTTGGTGTATTGCTACTTGAGATTATGAGTGGCCGCAAGAACACAAGCTTTCGTGACACAGATGACTCAAGTCTCATTGGATATGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTGTTGATCCTTCCCTTGGTGATTCAATTCCTAAGACTAAAGCGTTGAGGTTCATACAAATAGGGATGTTATGCGTGCAAGATTCAGCATCTCGTAGACCAAACATGTCATCTGTGTTGTTGATGCTGGGAAGTGAATCAACAGCTCTACCTTTGCCTAAGCAACCTTTGCTCACTACTTCCATGAGGATACTTGATGATGGAGAATCTTATAGCGAAGGCCTTGATGTGTCAAATGATTTGACAGTTTCAATGGTGACAACAGGGAGATAG 2556 0.4257 MTTKRQHAILLLLLFFCSHTLFSHAADSITEDTVIRDNDGGDNLVSKDLTFEMGFFGLDNNNSSRYVGIWYHEIPVKTFIWVANREKPIKGREGSILIQKSNGNLIVLDGENNEVWSTNMSVPRNNTKAVLRDDGNLVLSEHDKDVWQSFEDPVDTFVPGMALPVSAGTNIFRSWKSETDPSPGNYSMKVDSEGSTKQILILEGEKRRKWRSGYWDGRVFTGVSDVTGSSLFGFTVITDTKGEEYFTYKWNSPEKVRFQITWDGFEKKFVLDADGKQWNRTQFEPFDDCEKYNFCGSFAVCDTGNSPFCSCMEGFEPMHWEEWNNRNWTRGCGRRTPLKAEAERSANNSSSGADREVSVGEDGFLEQRCTKFPDFARLENFVGDADCQRYCLQNTSCTAYSYTIGIGCMIWYGELVDVQHSQNNLGSLLHIRLADADLGDGGKNTKIWIILAVVVGLICIGIVVLLVWRFKRKPKAVSSASGFNNNSEIPAFDLTRSTDLSEISGELGLEGNQLSGAELPLFHFSCILAATNNFSDENKLGQGGFGPVYKGKIPGGEDVAVKRLSRKSSQGLEEFKNEMVLIAKLQHRNLVRLLGCCIQGEEKILVYEYLPNKSLDCFLFDPVKQTQLDWAKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDESMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSIKSDVYSFGVLLLEIMSGRKNTSFRDTDDSSLIGYAWHLWSEQRVMELVDPSLGDSIPKTKALRFIQIGMLCVQDSASRRPNMSSVLLMLGSESTALPLPKQPLLTTSMRILDDGESYSEGLDVSNDLTVSMVTTGR* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0507 851 ProSiteProfiles PAN/Apple domain profile. 359 434 IPR003609 -
Gso8g0507 851 Gene3D Transferase(Phosphotransferase) domain 1 610 811 - -
Gso8g0507 851 PIRSF SRK 1 850 IPR024171 GO:0004674
Gso8g0507 851 Pfam Protein tyrosine and serine/threonine kinase 537 801 IPR001245 GO:0004672|GO:0006468
Gso8g0507 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 215 IPR036426 -
Gso8g0507 851 SMART blect_4 37 153 IPR001480 -
Gso8g0507 851 CDD STKc_IRAK 540 804 - -
Gso8g0507 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Gso8g0507 851 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Gso8g0507 851 SMART ntp_6 359 433 IPR003609 -
Gso8g0507 851 Gene3D - 21 150 IPR036426 -
Gso8g0507 851 Pfam PAN-like domain 360 418 IPR003609 -
Gso8g0507 851 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Gso8g0507 851 SUPERFAMILY Protein kinase-like (PK-like) 519 821 IPR011009 -
Gso8g0507 851 CDD B_lectin 40 153 IPR001480 -
Gso8g0507 851 Pfam D-mannose binding lectin 78 175 IPR001480 -
Gso8g0507 851 CDD PAN_AP_plant 361 434 - -
Gso8g0507 851 SMART serkin_6 534 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0507 851 Gene3D Phosphorylase Kinase; domain 1 505 609 - -
Gso8g0507 851 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 851 - -
Gso8g0507 851 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0507 851 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0507 Gso-Chr8 4701672 4706376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0507 522 834 Receptor kinase-like Gene Family AT4G11530 61.709 4.10e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso8g0507 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0507 - - gsj:114421325 1721.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1604 7 37834843 37839219 Gso8g0507 8 4701672 4706376 GST
Gso8g0507 8 4701672 4706376 Gso15g0560 15 4957791 4961589 PCT
Gso8g0507 8 4701672 4706376 Gso11g2735 11 43281000 43284775 PCT
Gso11g2733 11 43261551 43265410 Gso8g0507 8 4701672 4706376 PCT