Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0506 ATGACGTCACACTCCCACTACCCACCCGATTTAGACGCCGACTCCGTCACCTCCTCCCCACGCTCCGATCACTTCCACGACGCGCCGCCCCGCATCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGCGGCGACACCCGCATCGTCGCCGTCAACCGCTCCATTACTTTCTCCGCCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGAGCAACATAACAGCCAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTGATCTCGGTCACCACGGACGAGGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACACAATCAGAACCCGCGATCGGCGCGGCTCCGGCTCTTCCTCTTCCCAGAAGGAGAAGACTCCCGCGCCAGCAGCATCAGCTCGCTCCTAAACGGCTCAGCCAAGCGCGAAAACTGGTTCCTCGACGCTTTAAACGGCGGCGTTTCGGGCCTCGAACGAGGCCGCTCCGAAGCCTCTTCTATGGTCTCTGAAGTACCCGATTACCTCTTCGGGTTAGACAACTCCGAAGAAATAACAAATCACCAACGCGACCCGAGACCCAAACCCGGACCCATTATTCAAGATAACGTTTCCGTTTCAGATCCGGGTTCGCCCGCCCCGGTTGTCTCGTCCCCTTATTGTTCCACGTCATCAGCGCCGCCCGTGCCCTCTCTCCCGAACCTTCCCTATGTTAAAACCAAACCTTTAAACTTAAATCCGGTTCCTGATACTGACTCCAAGGAAAATCAAACCGAACCTGAAACGGAACCTCACCCGAACCTGAACCTGAACCAAAACCCGAACATGTATTCAAATAACCCTGTTGTTCACTACCCTCCAGAAGCTGCTTATTCGGCGCATTCAGTAAACCCGGTTCCGGTTTACTATGTTTCCGGTCCGGTTCGACCGGGATCCGTGCCGGTTCCTATGCAAACCCCTTATCACTACGTTCAACAACCGTATCATGCTGTGGTGCCACCTCAGGTTCCTATCGGGTACCATCCTTTGGTTCCGGGTTCGGGTCAAGTATATGGAGCGGGCGTGAGGCACATGACCCCACTGCAACCTTACAGCCCCTCCACCACGGCGGTGGTTCATGACGGTTTGAAACAGCACGTGTATCATGCCGTGCCAAATTCGGGTCCGGTTCCGGTTCACCCAGTTATTCCGATGACGGGTTTGGATGAACCGCAGAGAGGTGGAGCGTAA 1266 0.5632 MTSHSHYPPDLDADSVTSSPRSDHFHDAPPRIRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSITFSALILKLSKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPEGEDSRASSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEEITNHQRDPRPKPGPIIQDNVSVSDPGSPAPVVSSPYCSTSSAPPVPSLPNLPYVKTKPLNLNPVPDTDSKENQTEPETEPHPNLNLNQNPNMYSNNPVVHYPPEAAYSAHSVNPVPVYYVSGPVRPGSVPVPMQTPYHYVQQPYHAVVPPQVPIGYHPLVPGSGQVYGAGVRHMTPLQPYSPSTTAVVHDGLKQHVYHAVPNSGPVPVHPVIPMTGLDEPQRGGA* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0506 421 MobiDBLite consensus disorder prediction 216 240 - -
Gso8g0506 421 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Gso8g0506 421 PANTHER OS05G0427100 PROTEIN-RELATED 5 419 - -
Gso8g0506 421 CDD PB1_UP2 35 134 - -
Gso8g0506 421 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 419 - -
Gso8g0506 421 MobiDBLite consensus disorder prediction 197 289 - -
Gso8g0506 421 SUPERFAMILY CAD & PB1 domains 47 143 - -
Gso8g0506 421 Gene3D - 52 135 - -
Gso8g0506 421 MobiDBLite consensus disorder prediction 274 289 - -
Gso8g0506 421 MobiDBLite consensus disorder prediction 1 28 - -
Gso8g0506 421 SMART PB1_new 46 136 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0506 Gso-Chr8 4688613 4690416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0506 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 1.74e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0506 - - gmx:100803004 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1606 7 37851976 37853804 Gso8g0506 8 4688613 4690416 GST