Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0480 ATGTGGGTATGGGTTGAAAACGGGAAAGATTTAAGGTGGTGTTATGTTAATTTAAACAGAGAGAGAACCGAGCGAGAAGGAGGCGAAGGAGGCAGAGCAGCAGTGCACAACAACGGAACTCTTTTCAGAGAAGAATCAGAATGGTCTGGGCTTTGTCATCTCAACTCTTTCTCGTTTAGGCTGAGGCTGGGCTTCACTATGTCTATGGCGGACACAAATACAAACTCAGTTGACGTGATTTTGGACTTTCTTAGGAGGAACCGATTCACCAGAGCTGAGGCTGCTTTGCTCAGTGAGATCAGTAATCGTCCGGACTTGAATGCCTTCCTTCAGAAGCCTCAAGGTCAAGGTCAAGAACTCATTGTCAAGGAAATTGAGTGTGGAACCAAATGGAAAACAACTTCGGAGGATTTATACTCCTGGAAGTTCAACCCCACCAATGGTCCTGTCAAGGCCACTGTATCCAAATGTCAAACTGTTGATGTAATTGCAGCCAATACCAATTCAAAGTCTGGGTCAGGGGAGGAAAATGCTGACAAAAAATCCATGTGGCCTGCAAGTAGTAGTAAAGCCTCTGTTGTGCAAAGCAAAGAACCTAGGGAACTTGATCGCCAACTTAAATTCAATAGTTCATCACTTGAAGTGAACTTCACAGATAATCCCTGCCCAAGAAAGGATGAGAATGTGAATTCGTCTTCAGACTCTGGCAAAGATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGGGGATGTGTCTACAAGCTTTGATGGTGCCAGTTATTCTTACAAAATAGAGGAGAAAAAAAAGGTAGAAATTAGTGATACTAGGACATCTATTGAAGAGCAGGTGGGTGAATTGGGGAGGCCTATTTTCTTGGTCAAGACACCAGGCAGTTCTGAACAGAAGATGATAGGAAGCTTAAGTTTTCCTCTCCCCCCTGAAAATCTGAAGGAGGATATTCCTAGGCTTCCTCCGGTTAAACTCAAGTCAGATGACAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAACCTCAAAACTCCCTGGGGCTGATAGCACTTTGCTTGTTGGTTCATATCTGGATGTACCTATTGGACAGGAAATTAACCCTTCAGGTATGAGGAAGGCTGCAGGGGGCTGTTGGTTATCTGTAAGTCAAGGGATAGCGGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGAGTTGAGTGAATCTATTGATTATCCGAATGAATATTGGGACTCCGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGACGATCAATCCTTTGCTGAGGAGGATTCTTACTTTTCCGGGGAGCGATATCTTCAGGAAAATAATGTTGAACCTGTCACAGCTACTGATGATCCTATTGGTCTAACACACACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACCTAATGTGTGCAGAACCGGTCTGGCGGGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATGTAAGATCACGGCTAGAGGACATCAGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCGTGATCGTGATGCAGGACTTGGTGGTTCTAGGCACTCTCATCATGATTTTGATAAGAAATCTACTAACAAATCAAACAAAAATAAGAACTACGAAAAGAGTGAATCAAATAAATATGTCATAGGATGTGATAAAGATGCACCGTTGCAGATGAAAACTCATGGTGATGGAAACTTCTCATTTCCCCTATCTTTGAAGGATGGCCAGATGATTCAGGCTTCCACCAATAAGTCCCTGTGGTCAAATAACGGCAACACAGATGAAGCTGATGACTGTCTTCATGCATTTGTGGGAACTGATGACATGCTTGCTTTGTGGAGGCGAAAGAGCAGTGATTCTTCACCTGTTAAAAGTTCTAGGGATGAGAATAATGCCGACATTGTAAGATCCACAAACTCTTCTCCAACAACAGTCTCAAATTATGGGTATTCTGAAAGAGAGCATGTGAAAGTAGAAGATGAAAAGACTGGAATTGCAAGGGAAGATGATCTTGGAGCATCGCTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGAAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGAGGTATCATGTTACTGAGTATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGACGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATACGATTATTTCTATTATCGAGAGCATTTGTTAATAGTATGTGAGCTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCTCTTCAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAATATGCTTGCAAAAGGACGGGACACATATAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACCGGTTAGAATACTTGATTCCGAAAAAGACATCCCTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTTGAAGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAGGCCCTGAAGCATCCATGGTTGTCATACCCATATGAACCAATATCATCTTGA 3483 0.4195 MWVWVENGKDLRWCYVNLNRERTEREGGEGGRAAVHNNGTLFREESEWSGLCHLNSFSFRLRLGFTMSMADTNTNSVDVILDFLRRNRFTRAEAALLSEISNRPDLNAFLQKPQGQGQELIVKEIECGTKWKTTSEDLYSWKFNPTNGPVKATVSKCQTVDVIAANTNSKSGSGEENADKKSMWPASSSKASVVQSKEPRELDRQLKFNSSSLEVNFTDNPCPRKDENVNSSSDSGKDCSVKTVFPFSKGDVSTSFDGASYSYKIEEKKKVEISDTRTSIEEQVGELGRPIFLVKTPGSSEQKMIGSLSFPLPPENLKEDIPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKLPGADSTLLVGSYLDVPIGQEINPSGMRKAAGGCWLSVSQGIAEDTSDLVSGFATVGDELSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQENNVEPVTATDDPIGLTHTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDISMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDRDAGLGGSRHSHHDFDKKSTNKSNKNKNYEKSESNKYVIGCDKDAPLQMKTHGDGNFSFPLSLKDGQMIQASTNKSLWSNNGNTDEADDCLHAFVGTDDMLALWRRKSSDSSPVKSSRDENNADIVRSTNSSPTTVSNYGYSEREHVKVEDEKTGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQNMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0480 1160 MobiDBLite consensus disorder prediction 625 659 - -
Gso8g0480 1160 MobiDBLite consensus disorder prediction 167 201 - -
Gso8g0480 1160 Gene3D Transferase(Phosphotransferase) domain 1 903 1151 - -
Gso8g0480 1160 MobiDBLite consensus disorder prediction 454 487 - -
Gso8g0480 1160 CDD PKc_DYRK_like 849 1151 - -
Gso8g0480 1160 PANTHER DUAL SPECIFICITY PROTEIN KINASE 271 1158 - -
Gso8g0480 1160 ProSitePatterns Serine/Threonine protein kinases active-site signature. 975 987 IPR008271 GO:0004672|GO:0006468
Gso8g0480 1160 MobiDBLite consensus disorder prediction 734 770 - -
Gso8g0480 1160 Coils Coil 801 821 - -
Gso8g0480 1160 Pfam Protein kinase domain 849 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0480 1160 ProSiteProfiles Protein kinase domain profile. 849 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0480 1160 Gene3D Phosphorylase Kinase; domain 1 843 930 - -
Gso8g0480 1160 MobiDBLite consensus disorder prediction 742 768 - -
Gso8g0480 1160 PANTHER - 271 1158 - -
Gso8g0480 1160 SMART serkin_6 849 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0480 1160 SUPERFAMILY Protein kinase-like (PK-like) 838 1153 IPR011009 -
Gso8g0480 1160 MobiDBLite consensus disorder prediction 217 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0480 Gso-Chr8 4411503 4422155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0480 848 1146 MAP Kinase Gene Family AT5G19010 30.094 1.42e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso8g0480 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0480 - - gmx:100802148 2143.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2119 5 44106060 44117812 Gso8g0480 8 4411503 4422155 GST
Gso8g0480 8 4411503 4422155 Gso16g1757 16 38167204 38175965 PCT
Gso8g0480 8 4411503 4422155 Gso9g1396 9 37906497 37915285 PCT
Gso16g1757 16 38167204 38175965 Gso8g0480 8 4411503 4422155 PCT
Gso9g1396 9 37906497 37915285 Gso8g0480 8 4411503 4422155 PCT