Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0468 ATGCTGCCTCAGAAGCACACTCTGGTGGCGACACTGGCTGTGGTGCTCGCAGTAGCACAAGCAGTAGATCTGGCTTCCGAGCGAGCCGCATTGCTCGCTCTCCGTTCCGCCGTGGGAGGCCGAACCCTCTTCTGGAACGCCACCAGGGAGAGCCCCTGCAATTGGGCCGGGGTCCAATGCGAGCACGACCACGTCGTCGAGCTTCACCTCCCCGGTGTCGCTCTCTCCGGCGAAATCCCGGTCGGTATATTCGGGAATCTGACCCAGCTCCGAACCCTTAGTCTCCGTTTCAACGCACTCCGAGGTTCCCTCCCTTCAGATCTGGCCTCCTGCGTCAACCTCCGCAACCTCTACATTCAGCGCAACTTGCTCAGCGGCCAAATCCCACCCTTTCTGTTTGATTTTGCGGACCTGGTTCGCTTGAACTTGGGCTTCAACAACTTCTCCGGGCCCTTTCCCACCGCCTTCAACAGCCTCACCCGCTTGAAAACTTTGTTTCTCGAAAACAACCAGCTCTCCGGCCCAATCCCCGACCTGGACAAACTCACCCTCGACCAGTTCAACGTCTCCGACAACCTCCTCAACGGCTCTGTCCCTCTTAAGCTTCAGGCATTCCCTCCGGACTCTTTTCTAGGTAACTCCCTCTGTGGCCGCCCACTCTCTCTCTGTCCCGGAGATGTTGCCGATCCTCTCTCCGTCGACAACAACGCCAAGGACAGCAACACCAACAACAAGAGCAAGTTGTCCGGGGGCGCCATAGCGGGAATTGTTGTCGGATCGGTGGTGTTTCTTCTCTTGCTTGTGTTCCTCTTCATTTTCCTGTGCAGGAACAAGAGTGCCAAGAATACCAGCGCCGTCGACATTGCCACTGTCAAACATCCTGAGACGGAGTCCAAAGTTCTTGCCGACAAGGGGGTCGCCGATGTCGAGAACGGCGCTGGTCATGCTAATGGCAACTCTGCGGTCGCAGCTGTGGCGGTGGGGAATGGCGGTAGCAAGGCGGCGGAAGGGAACGCGAAGAAGTTGGTGTTTTTTGGGAATGCGGCGAGGGCGTTTGATTTGGAAGATTTGCTTAGGGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTCGGGACGGCGTACAAGGCGGTGTTGGAGGCGGGGCCGGTGGTGGCCGTGAAGAGGTTGAAGGACGTGACCATTTCGGAGAAGGAATTTAGGGAGAAGATTGAGGCGGTGGGAGCGATGGATCACGAGAGTTTGGTGCCTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTCCTCGTCTATGATTACATGTCCATGGGAAGCTTGTCTGCGCTTTTACATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAGTGAGATCAGGCATTGCACTTGGAGCTGCCCGTGGCATTGAGTACCTACATTCACGAGGGCCTAATGTTTCTCATGGAAATATCAAGTCATCAAACATCCTCTTAACCAAATCATATGATGCGAGAGTGTCTGACTTTGGCCTTGCACACCTTGTTAGCCCCTCCTCTACCCCTAACCGTGTGGCCGGCTACCGTGCACCGGAGGTGACTGATCCTCGCAAGGTGTCTCAGAAGGTAGATGTGTACAGTTTTGGTGTGTTGCTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTGGACCTCCCCAGATGGGTTCAATCTGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTGGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTAGATTGTGCAGCACAATACCCTGACATGCGCCCTTCAATGTCTGAAGTGGTAAGGCGCATACAAGAGTTGCGAAGGTCTAGCTTGAAAGAGGAGGACCAGGACCAAATCCAACATGACAATGATATACAGTTATAG 1950 0.5426 MLPQKHTLVATLAVVLAVAQAVDLASERAALLALRSAVGGRTLFWNATRESPCNWAGVQCEHDHVVELHLPGVALSGEIPVGIFGNLTQLRTLSLRFNALRGSLPSDLASCVNLRNLYIQRNLLSGQIPPFLFDFADLVRLNLGFNNFSGPFPTAFNSLTRLKTLFLENNQLSGPIPDLDKLTLDQFNVSDNLLNGSVPLKLQAFPPDSFLGNSLCGRPLSLCPGDVADPLSVDNNAKDSNTNNKSKLSGGAIAGIVVGSVVFLLLLVFLFIFLCRNKSAKNTSAVDIATVKHPETESKVLADKGVADVENGAGHANGNSAVAAVAVGNGGSKAAEGNAKKLVFFGNAARAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFREKIEAVGAMDHESLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVSPSSTPNRVAGYRAPEVTDPRKVSQKVDVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDMRPSMSEVVRRIQELRRSSLKEEDQDQIQHDNDIQL* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0468 649 SUPERFAMILY Protein kinase-like (PK-like) 363 631 IPR011009 -
Gso8g0468 649 PANTHER OS05G0588300 PROTEIN 6 645 - -
Gso8g0468 649 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Gso8g0468 649 Gene3D Ribonuclease Inhibitor 137 223 IPR032675 -
Gso8g0468 649 SUPERFAMILY L domain-like 45 201 - -
Gso8g0468 649 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Gso8g0468 649 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 645 - -
Gso8g0468 649 ProSiteProfiles Protein kinase domain profile. 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0468 649 Gene3D Transferase(Phosphotransferase) domain 1 434 648 - -
Gso8g0468 649 CDD STKc_IRAK 365 628 - -
Gso8g0468 649 Gene3D Phosphorylase Kinase; domain 1 327 433 - -
Gso8g0468 649 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Gso8g0468 649 Pfam Protein kinase domain 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0468 649 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0468 Gso-Chr8 4318309 4321298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0468 23 629 Receptor kinase-like Gene Family AT1G48480 65.323 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso8g0468 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0468 - - gmx:100788892 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2107 5 44005957 44008642 Gso8g0468 8 4318309 4321298 GST
Gso8g0468 8 4318309 4321298 Gso7g0878 7 10019317 10022526 PCT
Gso8g0468 8 4318309 4321298 Gso9g1427 9 38334336 38337548 PCT
Gso7g0878 7 10019317 10022526 Gso8g0468 8 4318309 4321298 PCT
Gso9g1427 9 38334336 38337548 Gso8g0468 8 4318309 4321298 PCT